Oryza sativa japonica (Japanese rice): 4339066
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Entry
4339066 CDS
T01015
Symbol
PDC, PDC1
Name
(RefSeq) pyruvate decarboxylase 1
KO
K01568
pyruvate decarboxylase [EC:
4.1.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00010
Glycolysis / Gluconeogenesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
4339066 (PDC)
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.1 pyruvate decarboxylase
4339066 (PDC)
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Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_N
TPP_enzyme_M
TPP_enzyme_C
CO_dh
Motif
Other DBs
NCBI-GeneID:
4339066
NCBI-ProteinID:
NP_001389568
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All DBs
Position
5:join(23172556..23173080,23173183..23173346,23173440..23174090,23174190..23174307,23174400..23174588,23174713..23174883)
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AA seq
605 aa
AA seq
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MELALVGNPSNGVAKPSCNSVGSLPVVSSNAVINPPVTSAAGATLGRHLARRLVQIGATD
VFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSV
LNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINN
LDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEYA
VEAAADFLNKAVKPVMVGGPKIRVAKAKKAFAGIAESSGYPFAVMPSAKGLVPEHHPRFI
GTYWGAVSTTFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKREKAVIVQPDRVVVGNGP
AFGCILMTEFLDALAKRLDRNTTAYDNYRRIFIPDREPPNGQPDEPLRVNILFKHIKEML
SGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCI
GDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHN
SDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSR
PPNPQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgccctggttggcaacccttcgaatggcgtggcgaagccgtcgtgcaactcc
gtcggctcgctgcccgtcgtcagctccaacgccgtcatcaacccgccggtgaccagcgcg
gcgggcgccacgctcggcaggcacctcgcgaggcgcctcgtgcagatcggcgccaccgac
gtgttcgccgtccccggggacttcaacctcaccctgctcgactacctcatcgccgagccc
gggctcaagctcatcggctgctgcaatgagctcaacgccgggtacgcggccgacggctac
gcccgcgcccgcggcgtcggcgcctgcgccgtcacgttcaccgtcggtggcctcagcgtg
ctcaacgctatcgccggcgcctacagcgagaacctccccgtgatctgcatcgtcggcggg
cccaactccaacgactacggcaccaaccgcatcctgcaccacaccatcggcctcccggac
ttctcacaggagctccgctgcttccagaccatcacctgctaccaggccgtcattaacaac
ctcgacgacgcgcacgagcagatcgacaccgccatcgcgacggcgctaagggagagcaag
cccgtctacatcagcgtgggctgcaacctggcaggcctctcccacccaacgttcagtcgc
gagccagtgccactattcatctcgccaaggctgagcaacaaggcgaacttggagtacgcc
gtcgaagccgcggcggacttcctgaacaaggcggtgaagccggtgatggtcggtgggcca
aagatccgggtggccaaggcgaagaaggcgttcgccggcatcgcggagtcgagcgggtac
ccgttcgcggtgatgccgtccgcaaagggcctcgtgccggagcaccacccgcggttcatc
ggcacgtactggggcgccgtgagcaccaccttctgcgccgagatcgtcgagtccgccgac
gcctacctcttcgccggcccaatcttcaacgactacagctccgtcggctactccctgctg
ctgaagcgggagaaggccgtcatcgtgcagcctgaccgcgtggtggtcggcaacggcccg
gcgttcggctgcatcctcatgacggagttcctcgacgcgctcgccaagcgcctcgaccgc
aacacgacggcatacgacaactaccgccgcatcttcatccccgaccgcgagccgcccaat
ggccagcccgacgagccactcagggtcaacatcctcttcaagcacatcaaggagatgctg
tctggcgacaccgccgtcatcgccgagaccggcgactcgtggttcaactgccagaagctc
aggctccccgagggctgcgggtacgagttccagatgcagtacggctcaatcggttggtcc
gtcggcgccacgctcggatacgcccaggcggccaaggacaagcgcgtcatctcctgcatc
ggcgacggaagcttccagatgacggcgcaggacgtgtcgacgatgctgcggtgcgggcag
aagagcatcatcttcctcatcaacaacggcgggtacaccatcgaggtggagatccacgac
gggccgtacaacgtcatcaagaactgggactacaccggcctcatcgacgccatccacaac
tctgacggcaactgctggacaaagaaggtccggactgaggaggagctgatagaggcgatc
gcgacggcgacgggcgccaagaaagactgcctctgcttcatcgagatcatcgtgcacaaa
gatgacacgagcaaagagcttctcgagtggggatccagggtctcggctgccaacagcagg
ccgcctaatccccagtga
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