Oryza sativa japonica (Japanese rice): 4339167
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Entry
4339167 CDS
T01015
Name
(RefSeq) transcription factor GAMYB isoform X1
KO
K09422
transcription factor MYB, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4339167
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
4339167
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
4339167
NCBI-ProteinID:
XP_066166875
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All DBs
Position
5:complement(join(24225860..24225867,24225958..24226125,24226201..24226593,24226694..24227057,24227780..24228151))
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AA seq
434 aa
AA seq
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MHESDSDPDSDRTHWYMSNSDDESFVDKDKDCRRSTVALLLKKGPWTSWEDSILEKYIKK
HGERNWKLVQKNTGLLRCGKSCRLRWMNHLRPNLKKGAFSKEEENKIINLHRKMGNKWSR
MAADLPGRTDNEIKNYWNTRIKKCKNNRSPLYPANVCNDALNEDQHESADPNVREKLTNN
HLEDTTSMYSAPQFSDASISNILDRRLASKDYDSIEDQRNQIEVVAKYEIPLPVLKTTNN
DIFPSASIFANHGISNGNLSALSTTDALQMELPLIQFDPNNQFVYSRAYAMHLTNFALLN
DQSEELLNDTDVLNYVVMKEELSGGSLSPTINMPCEGMADSSELPLCKGYREQDLDFYTH
NSPVSSEELHNFELSFAHNSMAASNELVVPQYEGDAPPLQDDFTSYFYLNDTNLSIFEDT
NELFLENKLDTKGN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagagcgacagcgatcctgattctgacaggacacactggtatatgagcaatagc
gatgacgagtcatttgttgataaagataaagattgcagaaggagcaccgtagccctgctg
ttgaagaaaggtccatggacatcttgggaggactccatcttagagaagtacatcaagaag
catggtgaaaggaactggaagcttgtgcagaagaacactggcctcttgaggtgtggcaag
agttgccgtcttcggtggatgaaccatctgaggcctaacctaaagaagggggctttcagc
aaggaagaagagaataaaattattaatcttcatcgcaaaatggggaataagtggtctcgg
atggctgctgatttgccagggcgtactgataatgaaataaagaactactggaacactcga
ataaagaaatgcaagaacaatcgttcgcctttgtatcctgctaatgtatgcaacgatgct
ttgaatgaagatcaacatgagtctgctgaccccaacgttagggagaagctgaccaataat
catctagaagatactactagtatgtattctgcaccccagttttcagatgcttccatcagt
aatatacttgataggagacttgcatcaaaagattatgactccatagaagatcaaagaaac
caaatagaagttgtagcaaaatatgagattccacttcctgtgttgaaaacaacgaacaat
gacatatttccatcagcctctatctttgccaaccatggtatttcaaatggcaatctctct
gctttgtccacaactgatgctttgcagatggagctccctttaatccaatttgatccaaac
aaccagttcgtttactcaagggcttatgcgatgcacctaacaaactttgctttattaaat
gatcaatcagaagaattactaaatgatactgatgtattgaactatgtggtgatgaaagaa
gagctttctggagggagtttgagtcctactattaatatgccatgtgaaggtatggcagat
tcttcagaactccctttatgcaagggatatcgggaacaagatcttgatttttacacacac
aatagtccagtatcgtcggaagagcttcataactttgaactttctttcgcacataactcc
atggctgcctctaatgagctggtagtgccacaatatgaaggagatgctccacctcttcaa
gatgatttcacatcatatttctatttgaatgatactaatctatccatattcgaagacaca
aatgaattgtttttggaaaacaagttggatactaaaggtaactga
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