Oryza sativa japonica (Japanese rice): 4339210
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Entry
4339210 CDS
T01015
Name
(RefSeq) zinc finger CCCH domain-containing protein 36
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4339210
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
4339210
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GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_2
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
4339210
NCBI-ProteinID:
XP_015640223
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All DBs
Position
5:complement(join(24579577..24579606,24579691..24581123,24581232..24581401,24581523..24581706,24584223..24584346))
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AA seq
646 aa
AA seq
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MAGGGRGAGLPAAGEAAKAGRVGVGTTKRARDPSPNSKDPNGFVGVIAAEKKPALQLHGD
EKYQKKAGNDPVPPTIDDTSKTGGLHLHGGHVSQSPPDSNALSSQRFGSSSPGGDMKNKT
RKRTCTFYAQGRCKNGKSCTFLHEGEVSGSDNQVYGNHGGTGEGSEIQHPSSSKEHQFKN
SAGSSQHEIYRTLVHAYGEDNRGLTHPVVKHSCHMLKASHGFKIGGSLTANPTNEVVQLP
VVQEKNHEPYFMGHQISLGTNNCLNDMGAYSRLRLDGGKLQFEVAKGDSPRDSHLSRSYL
EKNPLKPDYRYQPFDSTISLDPHQYSKKLSAYGGATENLPHKHQEEKSSSHVSYSLNSYT
GFRKQGHDSSDFFLVNQSLRATSHHGTLPLHQLTPDKDASHHKGADFDKGGTSRSTLHVS
SSSQPVVASAGKLSPIKDEVWITSVPFVPSFNFPDFPGSTSPSKSQYDPLVDSIDPPKVE
SLNNLKTSNISCSISSQHVDTNVIRGGSLEKPLTFADKLARNVSAKGSNDFGLISYDRGH
SSSLDGDNRVKTCERKNDASLNNEKSDFRFHLVEHVKELVKPIWKEGNLSKEAHKLIVKK
SVDKIFASLEPNQMPETEKAITTYITASAPKIEKLVKAYVDRYRTS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggcgggcggggcgccgggctgccggcggcgggcgaggccgcgaaggccggg
cgggtgggcgtggggacgacgaagagggccagggacccgtcgcccaactccaaggatccc
aacggttttgttggagtgattgctgctgagaagaaaccagcactgcagcttcatggcgat
gaaaaatatcagaagaaagctgggaatgatcctgtacctcctaccattgatgatacatcc
aaaactggaggtcttcatttgcatggtggtcatgtatcacaaagcccacctgattctaat
gctttgagttcgcaacgatttgggagttcatctcctggtggagatatgaagaacaaaacc
agaaagcgtacctgtaccttttatgctcaagggcgatgcaagaatgggaagagttgcact
tttcttcatgaaggggaggtatctggttctgataaccaggtttatggaaatcatggaggc
actggagaaggatctgaaatacaacatccatccagctcaaaagagcaccagttcaaaaat
tcagcggggtcatcccaacatgagatatataggacccttgttcatgcatatggtgaagat
aatagggggttgacacatcccgttgttaaacatagttgtcacatgctaaaggcttcgcat
ggtttcaaaattggtggttcattgactgcaaatcctactaatgaggtggttcagcttcca
gtagttcaagagaagaatcatgaaccttatttcatgggacatcaaattagtttgggcact
aacaactgtttgaatgacatgggtgcctattctagattgcgcctagatggaggaaagctg
cagtttgaagtggccaagggtgacagtccaagggattcacatctatcaagatcttacctt
gaaaagaaccccttaaagcctgattatcggtatcaaccgtttgactcaactatttcatta
gatcctcaccaatatagcaagaagttgtcagcttatggtggagcaacagagaatcttcct
cacaaacatcaggaagaaaaaagttcaagccatgtctcatacagtttgaatagttataca
ggattcagaaagcaaggtcatgacagctctgattttttcttggttaatcagtctctccga
gcaacttctcaccatggaaccctgcctcttcatcaattaacacctgataaggatgccagt
caccataaaggtgctgattttgacaagggtggtacctctaggtctacattacatgtgagc
agttcatctcaacctgtggtagcatcggctgggaaactttccccaatcaaggatgaggtt
tggataacttcagtgccttttgtaccttcttttaattttcctgattttcctggcagtaca
tcaccttcaaaaagtcagtatgacccacttgtcgacagtatcgaccctcccaaagttgaa
agtttaaataatctgaagacctcaaacatatcctgcagcatttcaagccaacatgtagat
acgaatgttataagagggggaagtcttgaaaaaccattgacttttgctgacaagttggca
aggaatgtatctgctaaaggatcaaatgattttggtttgatttcatatgataggggacac
agctctagcctggatggtgataatagggtgaaaacctgtgaaaggaaaaatgatgcatca
cttaacaatgagaaatcagactttcgttttcatttggtggagcatgtaaaggagctggtg
aaaccaatctggaaggaaggcaatttgagtaaagaggctcataaactgattgtgaaaaaa
tctgttgataagatttttgcttcacttgagccaaatcagatgccagagactgagaaggcg
ataactacttatataacagcctctgcaccaaagatagaaaaacttgtgaaggcatatgtt
gatcgttatcgcacatcatga
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