Oryza sativa japonica (Japanese rice): 4339307
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Entry
4339307 CDS
T01015
Symbol
OsJ_19188, OsTLP10, OsTLP9, P0022D06.6, TULP10, TULP9
Name
(RefSeq) tubby-like F-box protein 9
KO
K19600
tubby and related proteins
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
osa03037
]
4339307 (OsJ_19188)
04990 Domain-containing proteins not elsewhere classified [BR:
osa04990
]
4339307 (OsJ_19188)
Cilium and associated proteins [BR:
osa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
4339307 (OsJ_19188)
Domain-containing proteins not elsewhere classified [BR:
osa04990
]
Other domain-containing proteins
Tubby family proteins
4339307 (OsJ_19188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
DUF3527
Motif
Other DBs
NCBI-GeneID:
4339307
NCBI-ProteinID:
NP_001407632
LinkDB
All DBs
Position
5:join(25614139..25614483,25615021..25615108,25616479..25616608,25617288..25617843)
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AA seq
372 aa
AA seq
DB search
MALWRCSSSWLSSVSRSSGGVGGGESKVSPEIAPVSGGEGEGEEEEGEEERWSRLLPELL
TEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRD
APMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGS
NSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGGNYEVGQVSY
KFNFLKSRGPRRMQCNIQCPVGQSTASDPLKKLISTSSPLALRNKAPRWHEHLQCWCLNF
HGRVTVASVKNFQLVAPAGTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAI
CLTSFGTKLACE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtggcggtgtagctcctcgtggctctcgtcggtgtcgcgctcgtcgggggga
gtcggcggcggcgaatcgaaggtgtcgccggagatcgcgccggtgagcggcggggagggg
gagggagaggaggaggagggggaggaggagaggtggtcgcggctgctgccggagctgctc
acggagatcatgcggcgcgtggacgccggcgccgagcggtggccgccgcggcgggacgtg
gtggcctgcgcctgcgtctgccgccggtggagggacgccgcggtgtccgtcgtgcggccg
ccgctggagtgcgggcggatcacgttcccttcctcgctgaagcagcctggaccaagggat
gctccgatgcactgcttcatcaggaggaacaaaaagaactcgaccttctacctttatctc
agcttaacacaggccctaacggataaaggaaagtttctgctggctgctcgaaggttcaga
aacggggcacatacagaatatatcatttcctatgattgtgatgatctatttccaggaagc
aattcgtatgttgggaaactgagatctgacttcctgggtacaaagttcatcatctatgat
agccagccaccatacgatggtgcaaagccctcacggagccaatcgagtcgtcgctttgca
agcaaacagattaacccaaatgtttcaggcggtaattatgaagttggacaagtgtcatac
aagttcaacttcctcaaatcaagaggaccaagaagaatgcagtgcaatatccagtgcccc
gtaggccagagcaccgcatcagatccattgaagaagctgattagcacctcaagccccttg
gctctaagaaacaaggcaccacgatggcatgagcatctgcagtgctggtgcttgaatttc
catggccgggtgaccgtcgcctcggtgaagaacttccagctcgttgctccagctggcacc
agcgatccatggggcattgcagatgaggagacagtgatcctgcagttcggtaagattgag
gacgacgcgttcacgatggactaccggcagccgctgtcagccttccaggcgttcgccatc
tgcctcacaagctttggcacgaagctggcctgtgaataa
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