Oryza sativa japonica (Japanese rice): 4339343
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Entry
4339343 CDS
T01015
Symbol
CLPB1, hsp101, OsJ_19232, P0483D07.3
Name
(RefSeq) chaperone protein ClpB1 isoform 1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
osa03110
]
4339343 (CLPB1)
Chaperones and folding catalysts [BR:
osa03110
]
Heat shock proteins
HSP100
4339343 (CLPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
AAA_14
bpMoxR
nSTAND3
AAA_7
IstB_IS21
ATPase_2
AAA_28
TniB
NACHT
TsaE
Zeta_toxin
RNA_helicase
DUF815
NBD_SMAX1
AAA_19
Mg_chelatase
DNA_pol3_delta2
ResIII
AAA_25
ABC_tran
T2SSE
DUF87
DUF2987
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
4339343
NCBI-ProteinID:
NP_001389541
LinkDB
All DBs
Position
5:complement(join(25921740..25922039,25922137..25922334,25922419..25922698,25922787..25923591,25923690..25924845))
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AA seq
912 aa
AA seq
DB search
MNPDNFTHKTNEALVAAHEIASEAGHAQLTPLHLVAALAADKGGILRQAISQASGGDAGA
PDSFERVVSGALKKLPSQSPPPDSVPASTALIKVIRRAQSAQKKRGDSHLAVDQLLLGLL
EDSLISDCLKEAGVSAARVRAELEKLRGGEGRKVESASGDTNFQALKTYGRDLVEQAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKY
EGHHGVRIQDRALVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRIQLEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ
RREELQFTLQEAERRMDLARVADLKYGALQEIDVAIAKLESETGENLMLTETVGPEQIAE
VVSRWTGIPVTRLGQNDKERLVGLADRLHQRVVGQAEAVSAVAEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEE
GGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVIFDPLSHEQLRKVARL
QMKDVAVRLAERGVALAVTDAALDVILSLSYDPVYGARPIRRWIEKRVVTQLSKMLIQEE
IDENCTVYIDAAPHKDELAYRVDNRGGLVNAETGQKSDILIQVPNGAATGSDAAQAVKKM
RIMEDEDGMDEE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggacaacttcacgcacaagaccaacgaggcgctcgtggcggcgcacgagata
gcgtcggaggcggggcacgcgcagctgacgccgctgcacctggtggcggcgctggcggcg
gacaagggcgggatactccggcaggcgatctcgcaggcgtccggcggggacgccggcgcg
ccggactcgttcgagcgcgtggtgagcggggcgctcaagaagctgccctcgcagtcgccg
ccgccggacagcgtgccggcgtccacggcgctgatcaaggtcatccgccgcgcgcagtcc
gcgcagaagaagcgcggggactcccacctcgccgtcgaccagctgctgctgggcctcctg
gaggactcgctaatctccgactgcctcaaggaggccggcgtgtccgcggcgcgggtgcgc
gccgagctcgagaagctccgtggcggggagggccgcaaggtggagtccgcgtccggcgac
accaacttccaggcgctcaagacctacggccgcgacctcgtcgagcaggccggtaagctc
gaccccgtcattggccgcgacgaggagatccgccgcgtcgtgcgcatcctgtcgcgccgc
acgaagaacaaccccgtactcatcggcgagcccggcgtcggcaagacggccgtcgtggag
ggcctcgcgcagcgcatcgtgcgcggggacgtgcccagcaacctgctcgacgtccgcctc
atcgcgctcgacatgggcgcgctcgtcgccggcgccaagtaccgcggcgagttcgaagaa
cggctcaaggccgtgctcaaggaggtggaggaggccgagggcaaggtgatcctcttcatc
gacgagatacacctcgtcctcggcgccgggaggacggagggctccatggacgcggccaac
ctgttcaagccaatgctcgcgaggggccagctccggtgcatcggcgccacgacgctggag
gagtaccgcaagtacgtcgagaaggacgccgcgttcgagaggcggttccagcaggtgttc
gtcgcggagccgagcgtcccggacaccatcagcatcctgcgaggcctcaaggagaagtac
gaggggcaccacggtgtgaggatccaggaccgcgcgctcgtcgtcgccgcgcagctctcg
gcgaggtacatcatgggacgccacctgcctgacaaagcgatcgacctcgtcgacgaggcc
tgcgcgaacgtgagggtgcagctggacagccagccagaggagatcgacaacctcgagagg
aagaggattcagctggaggtggagcaccacgcgctggagaaggagaaggacaaggcaagc
aaggcccggcttgtcgaggtcaagaaagagctggacgatctgagggacaagctgcagcca
ttgacgatgaagtacaggaaggagaaggagaggatcgacgagatcaggaagctgaagcag
cgccgcgaggagctccagttcacgctgcaggaggccgagcgccggatggacctcgcccgc
gtcgccgacctcaagtacggcgcgctccaggagatcgacgtcgccatcgcgaagctcgag
agcgagacgggggagaacctgatgctcaccgagaccgtcggccccgagcagatcgccgag
gtggtgagccgctggaccggcatcccggtgacccggctcggccagaacgacaaggagagg
ctcgtcggcctcgccgacaggctgcaccagagggtggtcggccaggcggaggccgtgagc
gccgtcgccgaggcggtgctgaggtcgcgcgccggacttggccggccgcagcagcccacc
ggctcgttcctcttcctcggtcccaccggcgtcggcaagaccgagctcgccaaggccctc
gccgagcagctgttcgacgacgagaacctgctcgtccgcatcgacatgtccgagtacatg
gagcagcactccgtcgctcgcctcatcggagcaccacctggctacgtcggccatgaggaa
ggtgggcagctgacggagcaagtgcggcggcggccgtacagcgtgatcctgttcgacgag
gtcgagaaggcgcacgtcgcggtgttcaacactctgctccaggttctcgacgacgggagg
ctcaccgacgggcaaggccgcacggtggacttcaggaacaccgtgatcatcatgacctcc
aacctcggcgccgagcacctcctcgccggcatggtcggcaagaactccatgaaggtcgcc
cgtgaccttgtcatgcaggaggtgaggaggcacttccgtcctgagctcctgaaccggctc
gacgagattgtgatattcgatcccctgtcccacgagcaactcaggaaggtcgcccgtctc
cagatgaaggacgtcgccgtccggctcgccgagaggggtgtcgccctggccgtcaccgac
gccgcgctggacgtcattctgtctctgtcctatgatccggtttatggcgcgaggccgatc
aggaggtggatcgagaagagggtggtgacgcagctgtccaagatgctgatccaggaggag
atcgacgagaactgcacggtgtacatcgacgcggcgccgcacaaggacgagctggcctac
agggtggacaaccgcggggggttggtgaacgccgagacggggcagaagtcggacatcctc
atccaggtgcccaacggcgccgccaccgggagcgacgccgcgcaggcggtgaagaagatg
aggatcatggaggacgaggacggcatggacgaagagtag
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