Oryza sativa japonica (Japanese rice): 4339423
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Entry
4339423 CDS
T01015
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4339423
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
4339423
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GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
4339423
NCBI-ProteinID:
XP_015640069
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All DBs
Position
5:join(26582397..26582601,26582874..26583246,26583325..26583466,26584166..26584324,26584409..26584471,26584802..26584990)
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AA seq
376 aa
AA seq
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MATANPFDLLGGDDNDDPAQLLAKAAVAAQKAEAKKAAAAAAAPAAGKGGAQPAASKFPT
KPAPPSQAVRESRDGSAPSRGGYGRGERGRGRGGRGYGQNRDFGGEEMNGFQGGYGGGGG
SRAGGEEGAQDRERGPRPPFQGGGRRGGYGDDSERMSRRPYERHSGTGRGYEMKREGSGR
GNWGTTTDEILAQETGEALKLDEKAPVTEKQGAPEGAPQADENKDNKDVTPNEEEKEEDK
EMTLEEFEKLREEKRKALLSLKTEERKVEIDKDLKSMQPLSNKKENDEVFIKLGSDKDAL
KKKENAERDERAKKSVSINEFLKPAEGERYYGGRGRGRGRGDRGGFRGGYGEGHRSAAPP
APEIKDQSQFPTLGRK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcgaacccctttgacctcctcggcggcgacgacaacgacgaccccgcgcag
ctgctggccaaggcggccgtcgcggcgcagaaggccgaggcgaagaaggccgcggcggcg
gcggcggctccggccgccgggaagggcggcgcgcagccggccgcctccaagttccccacc
aagccggctcccccttcacaggccgtgagggagtctcgagatggcagtgcaccctcacgc
ggagggtatgggcgcggagaacgcggccgaggcagaggtgggcgaggctatggtcaaaac
cgagactttggaggtgaagaaatgaatggcttccagggaggatatggtggaggcggtggt
agcagagctggaggtgaagaaggcgctcaggacagggagaggggccctcggccacccttc
cagggaggaggtcgacgaggtgggtatggtgatgactctgagaggatgtctcggaggcca
tatgagcgccatagcggcactggccgtgggtatgagatgaagcgtgagggttcggggcgt
gggaactggggaactaccactgatgaaattctcgcccaggaaactggggaagccctgaaa
ttggatgagaaggcccctgttactgagaagcaaggcgcaccggagggtgctccacaggca
gatgagaacaaggataacaaagatgtcactccaaatgaggaagaaaaggaagaggataag
gaaatgactcttgaggagtttgagaaattaagggaggagaagaggaaagcacttctttct
ttgaagactgaagagaggaaggttgaaattgacaaggatttgaagtctatgcaaccactt
tccaataagaaagaaaatgatgaagttttcatcaaactgggatctgacaaggatgctttg
aagaagaaagaaaatgctgaacgtgatgagcgtgctaagaagtctgtgagcatcaacgag
ttcctaaaaccagctgaaggagagaggtactatggcggccgtggtcgtggcaggggccgc
ggggatcgtggcggtttcaggggtggatatggtgagggccatcgctctgcagctccacca
gctccagaaatcaaagaccaatcccaattccccactcttggtcggaagtga
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