Oryza sativa japonica (Japanese rice): 4339481
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Entry
4339481 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
4339481
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4339481
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4339481
03036 Chromosome and associated proteins [BR:
osa03036
]
4339481
03400 DNA repair and recombination proteins [BR:
osa03400
]
4339481
Peptidases and inhibitors [BR:
osa01002
]
Metallo peptidases
Family M67
4339481
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
4339481
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
4339481
BRISC complex
4339481
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
4339481
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
4339481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
4339481
NCBI-ProteinID:
XP_015640530
UniProt:
Q0DGB3
B9FLE7
LinkDB
All DBs
Position
5:join(27048852..27048962,27049067..27049192,27049300..27049387,27049933..27050018,27050124..27050309,27052111..27052304,27052863..27053021,27053107..27053187,27053278..27053332,27053408..27053584)
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AA seq
420 aa
AA seq
DB search
MSLTEVRIGEEVWLTCLSHALTTETEEVMGLLFGDIKHSSRGGVTALIWGASPQMRCERK
KDRVEVNPELLAAATAQAESLSATIGEKTRVIGWYHSHPHITVLPSHVDVRTQAMFQLME
PGFVGLIFSCFSEDAQKVGKIQVIAFQSLGGNQQSVVPVNDPVINLESSWSSLDDTSHPA
LIEGIEQDTGDSKSSRNSKVWAKSSDVDFYPHFDANHSAKHQSKENAIVAYDPNNAPETP
VDLDESDMTPSIQEALHRSNMDISGAEYVRKEVPLYVFPTRHLLKLDTTLTSYCDMQHVV
FEEEKSAYNQAMHQNIRDGKIHPLTSIHHASTYNSSLCKLMEYCLSPAITVLQDRLKENE
LRLSMLMEEAKQLEAENQSMRNDSPRRLMYHGTSGTSSLMAQDKQMSPRSPSGTGRRKAS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacggaggtcaggatcggggaggaggtgtggctcacctgcctctcccacgcc
ctcaccaccgagacggaggaggtcatgggcctcctcttcggcgacatcaagcattcgagc
aggggcggggtgactgctctgatatggggggcgtcgccgcagatgaggtgcgagcggaag
aaggacagggtggaggtcaaccccgagctgctcgcggcggcgacggcgcaggccgagagc
ttgtcggccaccatcggcgagaaaacgagggtgattggatggtaccactcgcacccgcat
atcaccgttctgccttcccatgtagatgttcggacccaggcaatgtttcagttgatggag
ccaggttttgtgggtctgatattctcttgttttagcgaagatgctcaaaaggttggaaaa
atccaagtgattgcttttcagtcacttggtggaaatcagcaatctgttgttcctgttaat
gatccagtcattaaccttgaatcatcttggagttcgttggatgatacctcacatccggca
ttgattgaaggcattgaacaagacacgggggattctaaatcttcaagaaatagcaaggtg
tgggcaaaatcttctgatgtggatttctatcctcattttgacgccaatcactcagcaaaa
catcaatccaaagaaaatgctatagttgcatacgatcccaataatgcacctgagacccct
gttgatctagatgaatcagatatgaccccaagcatccaggaggcgttgcacaggtcaaac
atggacattagtggtgcagaatatgtaagaaaggaggtgccactttatgtatttccgacc
aggcatctgctaaagctggacaccacattaacttcttactgtgatatgcaacatgtcgtt
ttcgaagaggaaaaatcagcatataatcaagccatgcatcaaaatattcgtgatgggaag
atccacccacttacatctattcaccatgcatctacatacaactcatctctctgcaaatta
atggaatattgtttgagccctgctataactgtacttcaggatcgtctgaaggaaaatgaa
cttcggttatctatgctaatggaggaggctaaacaacttgaggcagagaaccagagcatg
agaaatgattctcctcgtcgcttgatgtatcatgggactagtggcaccagttctctgatg
gcacaggataagcaaatgagccccagaagtcctagcggcaccggccggagaaaggcttcc
tga
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