Oryza sativa japonica (Japanese rice): 4339490
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Entry
4339490 CDS
T01015
Name
(RefSeq) myb-related protein Hv33
KO
K09422
transcription factor MYB, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4339490
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
4339490
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Peptidase_M13_N
SAP
Motif
Other DBs
NCBI-GeneID:
4339490
NCBI-ProteinID:
XP_015638185
UniProt:
J9PDC7
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All DBs
Position
5:join(27105829..27105967,27106084..27106213,27106339..27107008)
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AA seq
312 aa
AA seq
DB search
MGRLSSCGGVQAKLRKGLWSPEEDDKLYNHIIRHGVGCWSSVPKLAGLQRCGKSCRLRWI
NYLRPDLKRGSFSQQEEDLIVALHEILGNRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQ
RGLDPATHKPIAAAAAAATSSESAVTQVDEDHKPHGAAAAAAAADGLAANAKQSVFDPFP
VTDFGAGFDLGAANMAAALYGSHPDDGAGFVADYSSVLDVSENLGYGESSSNSSNWTCAE
VSNVLDSEVLNWAASAGADAAAKAEPFADMEQQHSGYGGEYQVEDDATLEHKFSLPCHEQ
SLAQFDFNLEYF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggacggctgtcgtcgtgcggcggcgtgcaggcgaagctgaggaaggggctttggtct
cccgaggaagacgataagctgtacaatcacatcatccgacatggcgtcggctgctggagc
tccgtccccaagctcgcagggttgcagcgatgcggcaagagctgcaggctgcggtggatc
aactacctcaggccagacctgaagcgcgggagcttctcgcagcaggaggaggacctcatc
gtcgcgctgcacgagatcctcgggaacaggtggtcgcagatcgcgtcgcacttgccgggg
aggacggacaacgagatcaagaacttctggaacagctgcctcaagaagaagctccggcaa
cgcggcctcgacccggccacgcacaagcccatcgccgccgccgccgcggcggcgacgtcc
tcggagtcggcggtcacccaggtggatgaggatcacaagccccacggcgccgccgccgcc
gccgccgccgccgacggcctcgccgcgaacgccaagcagtcggtgttcgacccgttcccg
gtgaccgacttcggcgccggcttcgacctcggcgcggcgaacatggcggcggcgctgtac
ggctcccaccccgacgacggcgccgggttcgtcgccgactacagcagcgtgctcgacgtg
tcggagaacctgggctacggcgagagctccagcaacagcagcaactggacctgcgccgag
gtgagcaatgtgctcgacagcgaggtgctcaactgggccgcctcggccggcgccgacgcc
gccgccaaggcagagcccttcgccgacatggagcagcagcacagtggctatggcggcgag
tatcaggtggaagacgacgccacgctggagcacaagttctcgctaccatgccatgagcag
agcttggctcaattcgacttcaacttggaatacttctga
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