Oryza sativa japonica (Japanese rice): 4339499
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Entry
4339499 CDS
T01015
Name
(RefSeq) FHA domain-containing protein DDL
KO
K13108
smad nuclear-interacting protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4339499
Spliceosome [BR:
osa03041
]
Complex B
Other components
RES complex
4339499
Complex C
4339499
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Gene cluster
GFIT
Motif
Pfam:
FHA
Motif
Other DBs
NCBI-GeneID:
4339499
NCBI-ProteinID:
XP_015639824
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All DBs
Position
5:join(27212070..27212966,27213569..27213600,27213887..27213953,27214141..27214198,27214354..27214446,27215391..27215505,27215872..27215919,27216037..27216082,27216186..27216256,27216890..27216929)
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AA seq
488 aa
AA seq
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MASAVERREHSRRSGRSRSRSPARDRGSPPRRRSPPARRERSPAPRSRSPRRRSPVKTTS
SHRERSPVRRNGSPRRSPVRSIGRSPQRDRVKEQVRSPKQAQSRSRSPSPARKRESRSPS
PRSKRLRRAQSEREGADATEGDRRKTTSREERDSGRYRERDEGKDVSRDRKTEREDSRGS
FKDRKLDHDDDRDHSRDRRSDRSGASRETWSSRDDERRDSRGRRSDGDDRKVNSREQRAD
HDDRRDSARERRADRDESNGESGRSSRRGRSVSPEEHRHRGRRESRQSPRSSRSAAHGED
TSSVTDAASRSVDPDSLVKMNATAEALEAKEKQKPSFELSGKLAEETNRVAGVNLLHSEP
PEARKSDIRWRLYVFKGGEPLEEPLYVHRMSSYLFGRERKVADIPTDHPSCSKQHAVLQY
RLVEKEQPDGMMSKQVRPYLMDLGSTNGTFINENRIEPSRYYELFEKDTIKFGNSSREYV
LLHENSKD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcggtggagcggagggagcattcgcggaggtcggggcgctcgaggtcgcgc
tcgccggcgagggaccgtggctcgccgccgcgcaggcggagcccgcctgctcggagggag
aggtcaccggctccgaggagtcgctcgcctaggaggaggtctcctgttaagactactagc
tcacatagggagaggtcgcctgttcggaggaatggctcacctaggaggtctcctgttagg
agtattgggaggtcgccacagagagatagggtgaaggagcaggtcaggtcgccgaaacaa
gctcagtcacggtcacggtctccgtcacctgccaggaaacgggagtctcggtcgccctca
ccacggagcaaacgattgagaagggctcagagtgagcgggaaggtgcagatgctactgag
ggtgaccgtcggaagaccaccagcagggaagagcgggactcggggaggtacagggagcgt
gatgagggaaaggatgtgtcaagggatagaaagactgagagggaggatagtaggggctct
tttaaggacaggaaactggatcatgatgatgatagggatcactcaagagatagaaggtct
gatcggtcgggtgcttcaagggagacatggtcaagccgagatgatgaaaggcgtgattca
aggggtagaaggtctgatggggatgatcgaaaagtcaattccagggagcaaagggcagat
catgatgatagaagggattctgcaagagagagaagggcagaccgggatgagagcaatggt
gaatcagggagatcatctaggcgtgggcgatcagtgtctccagaagagcataggcatagg
ggtagacgtgaatcccgccagtcaccgaggtcatctagaagtgcagcacatggtgaggat
acaagctctgtaacagatgcagcgtcacggagtgttgatcctgattctttggtgaagatg
aatgctactgcagaagctctggaagcaaaagaaaagcaaaaaccatcatttgaattgtct
ggaaagcttgctgaggagactaacagagttgcaggtgtaaatctgttgcattcagaacct
ccagaggctcgcaagtcagatattagatggagactctacgtcttcaagggtggtgaacca
ctcgaagaaccattatatgttcaccggatgagcagctacctttttggaagggaacggaaa
gttgcagacatccccacagatcatccctcctgcagtaagcaacatgcagttcttcaatat
agacttgtagagaaggagcagccagatggcatgatgtcaaagcaagtgaggccttatctg
atggatcttggtagtaccaatggaactttcattaatgagaatcgtattgagcccagccgt
tattatgaactctttgaaaaggataccattaagtttggcaatagtagccgggagtatgtt
ttgcttcatgaaaactcgaaagattga
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