Oryza sativa japonica (Japanese rice): 4339579
Help
Entry
4339579 CDS
T01015
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 24
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4339579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4339579
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
4339579
Ubiquitin system [BR:
osa04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
4339579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-C_UBE2O
RWD
Motif
Other DBs
NCBI-GeneID:
4339579
NCBI-ProteinID:
XP_015639645
UniProt:
B7F902
LinkDB
All DBs
Position
5:complement(join(27910380..27910607,27911013..27911324,27911422..27911561,27912121..27912184,27912299..27912505,27912578..27912721,27912806..27912937,27913108..27914511))
Genome browser
AA seq
876 aa
AA seq
DB search
MDLYAIDSDTESYAETSDSEEDQEECELTYCGHAQNILSSLDESIGKIDNFLSFERGFLH
GDIVCSAADPSGQLGRVVGVDMLVDLETSSGDIIKHVNSKKLSRVRSFVSGDCVVMGPWI
GRVIRAFDLVTVVFSDGARCEMLLRDSEVLKPIPPILFEDAPYFYYPGQRVRIVHPSISK
SGTWLCGSWKASRDEGVVSHVDVGLVHVNWITSVTNVWGGQSSSPPNFQDPKKLTLLSCF
PYANWQLGDWCTLSDCEGSLWENSDKSCFMSMTWKSSSDTQTAIGTYGSDYSQTYVVAKT
KSSVDVLWQDGSTSLGLEPQSLVPVSTLGDHDFWPGQFILEKLTVEDNGRCQRTGIVTSV
DALERTVKVKWAVSVDSDTVSYGDGLTEETVSAYELVLHPDFSFFTGEVIIRSAVNIENS
EANLTNGTVAVSRESLDTSSAFLSCIGNVLGYNDEGLEVQWASGAISRVQHFEIIALDRI
LDDSLESMIEEHTTDDLVDMAEQEKMHLEDTKSALEESAGDCTGSLRKATAFLFSKTAFN
FLTNVASSLFGAHDSTFSSSVNADSQYQIVTTAELQPSAEDISEEKQTMELITQFEKPTL
ASENAMTKGFDVVTDCSDHHFVKEIGHENVKRGWVKKIQQEWSILQNDLPDGIHVRVYEE
RMDLLRACLVGAAGTPYHDNLFFFDIFFPPDYPHEPPSVHYHSGGLRLNPNLYESGKVCL
SLLKTWAGTGSEVWDPENSTVLQLLLSLQALVLNEKPYFNEAGYDKFMGKADGEKNSITY
NENAFLLSCKSMTYILHKPPKHFENFVKEHFTCCAPHILDACKAYLGGDLVGHARDSAYI
SDDGCKNSSTGFKIMLAKLLPKLVTTFSEAGIPCSP
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggatctatatgcaattgactcggacactgagtcatacgctgaaactagtgacagtgaa
gaagaccaagaagaatgtgaacttacatactgtggtcatgcccagaacatcttgtccagc
ttggacgagagcattggaaagatcgataactttctaagttttgaaagaggatttctgcat
ggagacatagtttgctctgcagctgacccatcaggtcagctgggccgtgtagttggagtt
gatatgcttgttgacttggaaacgagctctggtgacataataaaacatgtcaacagcaag
aaactttcaagagttagatcctttgtctctggtgattgtgtggtgatggggccatggatt
ggacgggtgatcagggcatttgacctggtcactgttgtgttcagtgatggggcaaggtgt
gaaatgctcttaagagattctgaggtactgaagcccattcctccaatcctttttgaagat
gcaccttatttttactatccaggccaacgtgtgagaattgttcatccttccatttctaag
tcgggtacatggttgtgtggatcatggaaagctagtagagatgaaggagtagtgtctcat
gtcgacgttgggctggtacatgtgaactggatcacctcagtaacaaatgtttggggaggt
caatcatcaagtcctccaaactttcaggacccaaagaagctcactttgctttcatgcttc
ccttatgccaattggcagttgggtgactggtgcactctttcggattgcgagggaagtctc
tgggaaaattctgacaaatcttgcttcatgagtatgacctggaagtccagctccgacact
caaacggctatcggaacttatggttcagattattctcaaacatatgttgttgcaaagaca
aagagtagtgttgatgttttatggcaagatggaagtacatctcttggtttagaacctcaa
agtttggttcctgtgagtactcttggtgatcatgatttttggcctgggcaatttatcctt
gagaaattgacagttgaggataatggtagatgccagcggactgggatagtgacaagtgtg
gatgcacttgaacggactgtaaaggtaaaatgggctgtttcagttgatagtgacactgtc
agttatggagatggactcactgaggagactgtgagtgcttatgagctagtattacaccca
gatttctccttcttcactggcgaagtcattattagatctgctgtcaacatagaaaattct
gaagcaaatcttaccaatggaaccgtggcagttagcagggagagcttggatacctcctct
gccttcttatcatgtattggcaatgttcttggatacaatgatgaaggacttgaagtccaa
tgggctagtggtgcgatatctagggttcagcattttgaaattattgcattagataggatt
ctagatgattctctagaatccatgatcgaggagcacactactgatgatttggtagacatg
gctgagcaggagaaaatgcaccttgaggatactaagagtgcgctggaagaatctgctgga
gactgtacaggatccttgcgcaaagccactgctttcctcttttccaagacagcatttaat
tttctgacaaatgtggcttctagtttgtttggtgctcatgattcaacattttccagctcg
gtcaatgcagattctcagtatcaaattgtgacgacagcagaactgcagccatctgcagaa
gatatctctgaagagaaacagaccatggagctgataacacagtttgagaagccaacatta
gcttcagaaaatgccatgacaaaaggatttgatgttgtgaccgactgttctgatcaccac
tttgtcaaagaaattggtcacgaaaatgtcaaaagaggttgggtgaagaagatacaacag
gaatggtcaatcttacaaaacgatctgccagatggtattcatgttagagtttatgaagaa
aggatggacctcctgagggcatgccttgtaggtgcagctggaacaccttatcatgacaat
cttttcttctttgatattttctttcctcctgattatcctcatgagccaccttctgttcac
taccattccggtggcctccgtttgaacccaaatttgtatgagtctggcaaagtgtgcctt
agcctgctcaaaacatgggcaggaactggtagtgaagtgtgggaccctgaaaattcaact
gttcttcaactgctgctgtcccttcaagctcttgttctcaatgaaaaaccttacttcaat
gaggctggctatgacaaattcatggggaaagcagatggagagaagaactccatcacttac
aatgagaacgctttcctgctgtcatgcaagtccatgacgtacattttacacaagccacca
aagcatttcgagaattttgtcaaggagcacttcacttgttgcgcgccgcacattctggat
gcctgcaaggcttatctcggcggcgatcttgttggacatgctcgtgacagcgcctatata
tcggatgacggatgcaagaactcctcaaccggtttcaagataatgctagccaagctcttg
ccgaagcttgtcaccaccttctctgaagccggcatcccctgcagcccgtga
DBGET
integrated database retrieval system
