KEGG   Oryza sativa japonica (Japanese rice): 4339585
Entry
4339585           CDS       T01015                                 
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4339585
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4339585
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4339585
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     4339585
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   4339585
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    4339585
 Prokaryotic type
    4339585
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 tRNA-synt_2d EAD7 DUF2740
Other DBs
NCBI-GeneID: 4339585
NCBI-ProteinID: XP_015640680
UniProt: Q6AT40 Q0DG12
LinkDB
Position
5:join(27985611..27985668,27985770..27985825,27985925..27986034,27987050..27987179,27987362..27987477,27987572..27987638,27987870..27987911,27988054..27988095,27988257..27988333,27988631..27988757,27988854..27989021,27989260..27989385,27989476..27989586,27989677..27989811,27990441..27990515,27990728..27990835,27990916..27991002,27991088..27991174,27991663..27991731)
AA seq 596 aa
MPTVSVGRDRFFVALGRTYTQEEFEVLCFEFGIELDDVTTEKAIIRKEKHLEDDDGEVDG
DDDEVIYKIEVAANRYDLLCLEGLARALRIFTGTEATPMYKISCIPRDSMLLMHVKPQTS
QIRPYVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLKGPFSYEA
LPPQEINFVPLKQEESFRADKLMEFYKSDMKLKKFLHIIENSPVYPVIYDSNRTVLSLPP
IINGAHSAITLKTRNVFIECTATDLTKAKIVLNTMVTMFSEYCENKFEVEPVEVVSHDGS
KTIYPDLSCYKMEVSLSEVVGPIGISLDETKVISLLNKMQLQAESCPSKGEPRISVSVPP
TRSDILHARDLVEDVAIAYGYNNVPKSKPKCMTIGGRQPLNRFSDKLRAEVARAGYMEVL
TFTLCSREENFDMLNRTQDVNKAVIIANPRTSEFEVVRTSLMSCLLKTLKHNIDHPRPIK
IFEVGDVVTLDGSRDVGASNNRRLAALYCNKQSGFEEIMGLVDRIVNVVRAPHIKFGQNY
YVPTNEPEFFPKRQCKIVMSDGKQIGYLGIVHAEVLRKFGIPDPCTFVEIDVEALL
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgccgacggtgagcgtcggccgggaccgcttcttcgtcgccctcggaaggacatacacg
caggaggagttcgaggtgctctgcttcgagttcggcatcgagctcgatgacgtgaccacg
gagaaggccatcatccggaaggagaagcacctggaggatgatgacggcgaggtggatggt
gatgacgacgaggtcatctacaagatcgaggtcgccgccaataggtatgatttgttatgt
cttgaaggattggcaagggccctccgcattttcactgggactgaagcgacccctatgtac
aaaatttcttgcatccctcgcgattcaatgcttctgatgcatgttaaacctcagacttca
caaataaggccctatgtggtctgtgctgtccttagaggggtaactttcgatgaagcaaga
tataacagcttcatcgatcttcaagacaaactccatcaaaatatttgcaggaagagaact
ctggtggccataggtacccacgatcttgacactctgaaaggacccttttcatatgaggct
ctaccaccacaagagatcaactttgtcccattaaagcaggaggaaagcttcagggctgat
aaactgatggaattctataaatcagacatgaagttgaagaagttcctgcatataattgag
aattcgccagtatacccagttatttatgatagcaacaggaccgtattgtctttaccacca
atcatcaatggtgcacattctgctatcactctgaagacaaggaatgtgtttattgagtgt
accgctactgaccttacaaaagcaaagattgttctcaatacaatggtcacaatgttctct
gagtactgcgaaaacaagtttgaagtggaaccagttgaagttgtgtcacatgatggaagc
aaaaccatttaccctgacctttcatgctataaaatggaggtctcactatctgaggttgtt
ggacccattggcatctccctagatgagacaaaggttatttcccttctgaacaaaatgcag
ttgcaagctgaaagttgtccatcaaaaggggaaccacgtatttcagtttctgtccctcca
acaagaagtgacattctgcatgctcgtgatttggtggaggatgttgctatagcttatggt
tacaacaatgtgccaaaatcaaagccaaagtgtatgacaataggaggaaggcaaccatta
aaccgtttctctgataaacttcgtgctgaggttgcaagagctggttatatggaggtgctc
acatttaccttgtgttcacgtgaagaaaactttgacatgttaaataggacacaggatgta
aataaagcagttattattgcgaatccacgcacttctgaatttgaggtggttcgaaccagt
ctgatgtcatgtttattgaaaactttgaagcataacatagaccatccaagacccataaag
atatttgaagttggtgatgtagtgacattggatgggtcacgtgatgttggtgcttctaat
aatcgtcgactcgcagctttgtactgtaataagcagtctgggtttgaggaaattatgggt
ttggtagatagaatcgtgaatgttgtgagagctccccacatcaaatttggccagaattac
tatgttcctacaaatgaacctgaattctttccgaaaagacaatgcaaaattgttatgagt
gatggaaagcagattggctacttaggaattgtgcatgccgaggtcctaaggaaattcggc
attccagacccctgcactttcgttgagattgacgttgaggctttgttatag

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