Oryza sativa japonica (Japanese rice): 4339603
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Entry
4339603 CDS
T01015
Name
(RefSeq) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00541
Biosynthesis of various nucleotide sugars
osa01100
Metabolic pathways
osa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
4339603
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
osa01005
]
4339603
Enzymes [BR:
osa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
4339603
Lipopolysaccharide biosynthesis proteins [BR:
osa01005
]
Lipid A
4339603
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
DUF2064
NTP_transferase
DUF1627
Motif
Other DBs
NCBI-GeneID:
4339603
NCBI-ProteinID:
XP_015637518
UniProt:
Q688Y2
B9FLL4
LinkDB
All DBs
Position
5:complement(join(28121217..28121309,28121639..28121749,28121855..28121906,28121986..28122125,28122389..28122513,28122605..28122691,28122944..28122989,28123799..28124038))
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AA seq
297 aa
AA seq
DB search
MPICPPSSESSPAPGLGGRALIFHGLALGAAAAAAAAAAYLYRRPGGFRGRAVGIIPARF
ASSRFEGKPLAPILGKPMIQRTWERVMLASSLDHVVVATDDERIAECCRGFGADVIMTSE
SCRNGSERCCEALQKLNKHYDIVVNIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTAL
KPEDASDTNRVKCVLDNQGYAIYFSRGLIPFNKSGKVNPQFPYLLHLGIAGFDSKFLKIY
PELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMRARNIQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctgcccgccgtcgtcggaatcctcgccggcgccggggttgggggggcgcgcg
ttgatcttccacgggttggccctcggcgcggcggcggcggctgcggcggccgcggcctac
ttgtacaggcggccgggcgggttccgcggccgcgcggtgggcatcataccggcgcgcttc
gcctcctcccgcttcgaggggaagccgctcgcccccatcctcggcaagcccatgatacag
agaacatgggaaagagttatgttagcctcctctttggaccatgttgtcgtggcaacggac
gatgaaagaatagctgaatgttgtagaggattcggagctgatgtaataatgacatcagaa
tcatgcagaaatggatctgagcgttgctgtgaggctcttcaaaagctaaacaagcattat
gatattgttgtcaatattcaaggagacgagcctcttattgaaccagagataatagatggt
gtagttatggcactacagcgagctcctgatgcagtctttagcacagctgtcactgcactg
aaacctgaagatgcatctgatacaaatcgagtgaagtgtgttttagataaccagggttat
gcaatatacttctcaagagggctgattccatttaataaatcagggaaagtcaatcctcag
tttccatatcttcttcatctgggcattgcgggctttgattccaagtttttgaagatctat
ccagagcttccaccaactccattacagctagaagaggatctcgagcaacttaaagttctt
gaaaatggatacaggatgaaggtaatcaaagttgatcatgatgcccatggtgtggatgcg
cctgaagatgttgagaaaatagaagcattgatgcgtgcaaggaacatccagtag
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