Oryza sativa japonica (Japanese rice): 4339616
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Entry
4339616 CDS
T01015
Name
(RefSeq) E3 SUMO-protein ligase MMS21 isoform X1
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4339616
03400 DNA repair and recombination proteins [BR:
osa03400
]
4339616
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
4339616
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
4339616
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
GIT1_C
Zn_ribbon_5
Mo25
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
4339616
NCBI-ProteinID:
XP_015640264
LinkDB
All DBs
Position
5:complement(join(28225230..28225378,28225454..28225536,28226242..28226381,28226705..28226815,28226941..28227051,28227143..28227214,28227300..28227371))
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AA seq
245 aa
AA seq
DB search
MSSVVNKLTNAAERESSEAETLIAEIRKAIGEMKSIAVDYERENKSDKVKQLEAAALELV
ASCEDCTCYADAIRKVPGAYQPSNQMTDFEKLIEAEVNKVKGNSSTSVENHLLIRQFREA
VWNVHHAGQPMPGDEQEDVLMTSTQTSILNVTCPLTGKPVIQLTEPVRCADCRHIYEKVP
IMHYIRNQKPPKCPIAGCPRVLQVGRVTCDSLLQVEIDELRSSGPSAPDAENIEDLTDDE
DDSNE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggtggtcaacaagctcactaacgccgccgagagggagtcgtcggaggcggaa
acccttatcgcggagattcgcaaggcgatcggcgaaatgaagtccatcgccgtcgattac
gagagggagaacaagtccgacaaggtgaagcagcttgaggcggcggcgctggaactggtt
gcttcgtgcgaagattgcacgtgctacgccgacgcgatccggaaggtgcctggggcgtac
cagccatctaatcagatgacggatttcgaaaagctgatcgaggctgaggttaacaaggtc
aaggggaactcatcaacatcagtagagaaccatctgctcattcggcagttcagagaggca
gtttggaatgttcaccatgctggccaaccaatgcctggtgatgaacaggaggatgttctt
atgaccagtacccaaactagcatcttaaatgtcacgtgcccattaactgggaagcctgta
attcaattgacagagccagttcggtgtgcggattgtaggcacatatatgaaaaagttcca
attatgcattacataagaaaccaaaaacctccgaagtgccctatcgcaggttgcccaaga
gtcttacaagtaggaagggttacctgtgattccctcctccaggttgaaatcgatgaatta
cgctcgtcagggccttctgctccagacgctgaaaacatagaggatttaactgacgacgag
gatgacagcaatgaatga
DBGET
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