Oryza sativa japonica (Japanese rice): 4339657
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Entry
4339657 CDS
T01015
Name
(RefSeq) THO complex subunit 7A
KO
K13176
THO complex subunit 7
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4339657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4339657
03041 Spliceosome [BR:
osa03041
]
4339657
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
4339657
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
4339657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
APG6_N
ArsR
YwqH-like
Motif
Other DBs
NCBI-GeneID:
4339657
NCBI-ProteinID:
XP_015638044
UniProt:
Q6AUN0
B9FLP3
LinkDB
All DBs
Position
5:complement(join(28542384..28542521,28542855..28543448))
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AA seq
243 aa
AA seq
DB search
MLAKGRKVAGRGGDMSAHYAFGLQEDDAIIKRRLLTRTTTTRGEPPLKKLQKKFMSFATE
VEKDADNISDCERLYKAFLQEINAFVLPLLKSKAVVDANLREKESFNELQDEIQRQILQA
QTDIEELKKKLEQSRIERLYKEECEAIRKMISLQPPRSETEKLIAGLEKEIANLEAENTA
CIRTLELRKKQLSLLLHVVEELQISIEDEQRSIADELRAGAEEQQNMSTDEGSGDASDAM
ALD
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaaagggaggaaagttgctggaaggggtggagacatgtctgcacactatgca
tttgggctgcaggaagatgatgcgatcattaaacgtaggcttctgaccaggacaacaact
accaggggtgaaccaccactaaagaagcttcagaagaagttcatgtcctttgccactgag
gttgagaaggatgctgacaacataagtgactgtgagaggttgtacaaggcctttttacag
gaaattaatgcttttgtgttgcctcttcttaagagcaaggccgtggttgatgcaaacctt
agggagaaggagagcttcaacgagctgcaagacgagattcagcgacaaatcttgcaagct
cagactgatattgaggaactcaaaaagaaactggaacagagcagaattgagaggctgtac
aaagaggagtgcgaagcgatcagaaaaatgatttctttgcagcctccacgatcggaaaca
gagaagctcatcgcgggtcttgagaaggagattgctaatttggaggccgagaatacagca
tgtataaggactctggaactaaggaagaagcagctttctcttcttcttcatgtggtcgag
gaattgcagatctcaatcgaagatgagcagaggagcatagcggatgagctgagagctggc
gctgaagagcagcagaacatgagcacagatgaaggtagcggcgatgcttcagatgccatg
gctttagactga
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