Oryza sativa japonica (Japanese rice) (RefSeq): 4339720
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Entry
4339720 CDS
T01015
Name
(RefSeq) sister chromatid cohesion 1 protein 1 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4339720
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
4339720
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
4339720
NCBI-ProteinID:
XP_015638092
UniProt:
Q0DFN3
Q6UFU7
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Position
5:28889503..28896941
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AA seq
608 aa
AA seq
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MFYSHQLLARKAPLGQIWMAATLHSKINRKRLDKLDIIKICEEILNPSVPMALRLSGILM
GGVAIVYERKVKALYDDVSRFLIEINEAWRVKPVADPTVLPKGKTQAKYEAVTLPENIMD
MDVEQPMLFSEADTTRFRGMRLEDLDDQYINVNLDDDDFSRAENHHQADAENITLADNFG
SGLGETDVFNRFERFDITDDDATFNVTPDGHPQVPSNLVPSPPRQEDSPQQQENHHAASS
PLHEEAQQGGASVKNEQEQQKMKGQQPAKSSKRKKRRKDDEVMMDNDQIMIPGNVYQTWL
KDPSSLITKRHRINSKVNLIRSIKIRDLMDLPLVSLISSLEKSPLEFYYPKELMQLWKEC
TEVKSPKAPSSGGQQSSSPEQQQRNLPPQAFPTQPQVDNDREMGFHPVDFADDIEKLRGN
TSGEYGRDYDAFHSDHSVTPGSPGLSRRSASSSGGSGRGFTQLDPEVQLPSGRSKRQHSS
GKSFGNLDPVEEEFPFEQELRDFKMRRLSDVGPTPDLLEEIEPTQTPYEKKSNPIDQVTQ
SIHSYLKLHFDTPGASQSESLSQLAHGMTTAKAARLFYQACVLATHDFIKVNQLEPYGDI
LISRGPKM
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgttctactcgcaccagctcctcgcgcggaaggctccgctcggccagatatggatggcg
gcgacgcttcactcgaagatcaaccggaagcggcttgacaagctcgacatcatcaaaatc
tgtgaggagattttgaacccgtcggtacccatggcactaaggctctccggaattctcatg
ggtggtgtggcgatcgtgtacgagaggaaggtgaaggctctgtatgatgatgtgtctcgg
tttctgattgagatcaacgaggcatggcgggtcaagccagtcgcagaccccaccgtactt
cccaagggcaaaacccaagccaagtatgaagcagtaacactgccagagaatatcatggat
atggatgtggagcagcccatgcttttctcagaggctgatactacaaggttccggggaatg
cgtttggaggatttggatgaccaatacattaatgtcaacctagacgatgatgacttctcg
cgcgctgagaatcatcaccaagctgatgcagaaaatatcaccctggctgataatttcggg
tctgggcttggagagactgatgtgttcaatcgttttgagagattcgacataacagatgat
gatgcaactttcaatgtcactcctgatggacacccacaggttccaagtaatctggttcct
tctccacctaggcaggaagactctcctcagcaacaagaaaaccatcatgctgcctcatcc
cctcttcacgaagaagctcaacaagggggggcatctgtaaaaaatgagcaagagcagcag
aagatgaagggtcagcaacctgctaaatcatcaaagagaaaaaaacgtaggaaagatgat
gaggtgatgatggataacgaccagataatgatcccaggaaatgtatatcaaacatggctg
aaggatccatcaagcctcattaccaaaaggcacagaatcaacagtaaagttaatcttatt
cggtcaatcaagataagagacctcatggacttgcccctcgtttctctaatatcttccttg
gagaagtcacccttagaattttattatcctaaggaacttatgcagctttggaaggaatgt
actgaagtcaagtccccaaaagctccatcttcaggagggcagcagtcatcatcaccagaa
caacagcaaagaaacttgcctcctcaggcatttccaacccagcctcaggttgataatgac
agggaaatgggatttcacccagtggactttgcagatgacatcgaaaaactccgaggaaac
actagtggggaatatggaagagattatgatgcttttcacagtgatcatagtgttactcct
ggaagtcctgggctaagtcgcaggtctgcttcaagctctggtggctctggacggggattt
acgcagttggatccagaagtacagttgccatccggaaggtccaagaggcagcattcatct
ggaaaaagctttgggaacctcgatccagttgaagaagaattcccattcgagcaagaactt
agagatttcaagatgagaaggctttcagatgttgggccaactccagacctgctggaagaa
atcgaacctactcaaaccccatatgaaaagaaatccaatcctatcgaccaggtcacacaa
tcaatccactcgtacctcaagctacactttgacaccccaggggcctcacagtctgaatca
ttaagtcagctagcacatgggatgactacagcaaaggctgcccgactcttctatcaagca
tgcgttttagcaactcatgattttatcaaggttaaccagctggaaccatacggagacatc
ttgatctcgaggggaccaaagatgtga
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