Oryza sativa japonica (Japanese rice): 4339782
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Entry
4339782 CDS
T01015
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4339782
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
4339782
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
4339782
NCBI-ProteinID:
XP_015639970
UniProt:
A0A0P0WRL1
Q6I5E4
LinkDB
All DBs
Position
5:join(29542416..29542593,29542747..29543158,29543264..29543408,29544485..29544643,29544724..29544783,29544890..29545087)
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AA seq
383 aa
AA seq
DB search
MGSKNQFDLLVDVDNDDPSHLIAAAEKKAAAAAASPKLASSPAPAPAKLPTKPAPPAQAV
REARNYGAPRDGAGRGGPGRGRGGGRGGRGGPRRDFGEGDANGFEGGYGGGGGFGDGGLA
RGEDGEGRQAERGRGPRQPYRGGGRRGGYSDGQSGDDYGRPRRAYERHSGTGRGYELKRE
GSGRGNWGTVTDEGLAQEVAEAVNTEEAPATAEDEKKPEDVPQSEVDKDKESPENEEEEK
EPEDKEMTLEEYEKVLEEKRKALLALKAEERKVEVDKELQAMQQLSVKKANEEVFIKLGS
DKDLKKKEKDEKDERTKKSLSINEFLKPAEGERYYNPGRGRGRGRGRGDRGGFYGGYNGN
GGRRQAAAPVIEDQAQFPSLGGK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggggtccaagaaccagttcgatctcctcgtcgacgtcgacaacgatgacccctcccac
ctcatcgccgccgccgagaagaaggctgcggcggcggccgcgtcgcccaagctcgcctca
tcgccggcgcccgctccggccaagctgcccaccaagcccgcgccacccgcgcaagccgta
agggaagcgaggaactacggtgctccacgcgatggggctggccgtggtggcccagggcgt
ggaagaggcggcggccgaggaggcaggggcggtccgaggcgagatttcggtgagggtgat
gccaacggctttgagggtggctatggtggtggtggtgggtttggtgatggtggattggct
cgcggtgaagacggtgaggggagacaggcagagaggggccgtgggccacgccagccctac
cgtggaggtggtcgccgcggtggctatagtgatgggcagagtggagacgactatggacgt
ccgcgcagggcgtatgagcgccacagcggcactggccgtggctatgagttgaagcgtgag
gggtctggccgcggcaattggggaactgtcaccgatgaaggccttgcacaggaagttgcg
gaggctgttaacactgaggaggctcctgcaactgcagaggatgagaagaaacctgaagat
gtgccacagtctgaggtcgacaaggacaaggagagtccagagaatgaagaagaagaaaaa
gaacctgaggataaggagatgactttggaggaatatgagaaagtgctggaggagaagcgg
aaagctttgcttgcactgaaggctgaggagaggaaagttgaagtcgacaaggagttgcag
gccatgcaacagctctctgtcaaaaaggctaatgaggaagtgtttatcaagctgggctct
gacaaggacttgaaaaagaaagaaaaggatgaaaaggatgaacgtaccaagaagtccctg
agcatcaatgaattcttgaagccggctgaaggagagaggtactacaaccctggccgtggt
cgtggccgtggcaggggtcgtggtgatcgtgggggtttctatggtggttacaatggcaac
ggtggtcgcagacaggctgccgctccggtgatcgaagatcaggcccagttcccctcgcta
ggtgggaaatga
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