KEGG   Oryza sativa japonica (Japanese rice): 4339847
Entry
4339847           CDS       T01015                                 
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
  KO
K14164  glycyl-tRNA synthetase [EC:6.1.1.14]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4339847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4339847
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     4339847
Transfer RNA biogenesis [BR:osa03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    4339847
SSDB
Motif
Pfam: tRNA_synt_2f tRNA-synt_2e DALR_1
Other DBs
NCBI-GeneID: 4339847
NCBI-ProteinID: XP_015643028
UniProt: Q0DFB6 A0ACM8Q5X5
Structure
LinkDB
Position
6:join(389803..390167,390237..390318,390408..390471,390614..390669,390879..390956,391111..391185,391414..391484,391688..391804,391893..391994,392174..392294,392429..392515,392686..392772,393215..393316,393607..393670,394559..394614,395163..395234,395518..395600,395931..395979,396313..396375,396611..396700,396801..396887,397050..397124,397200..397258,397489..397582,397659..397877,397976..398070,398482..398572,398641..398745,398825..398863,399241..399330,399516..399617,399815..399896,400053..400138,400242..400340)
AA seq 1068 aa
MAGLAPPPLLLLPLSSSLSPAAASHHPTSPPSRTRRRRRLLSAVASADGDAPSPVSVSAS
AATKGPSSSSVLTFQQAIQRLQDYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWN
VAYVEPSIRPDDSRYGDNPNRLQRHTQFQVILKPDPGNSQDLFLHSLSALGINVREHDIR
FVEDNWESPVLGAWGLGWEVWMDGMEITQFTYFQQSGSLPLLPVSVEITYGLERILMSLQ
GVDHFKNIQYTKGITYGELFLENEKEMSAYYLEHANVDNIQKHFDDFEEEARSLLSLWLP
IPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVKTRENLGYPLGTY
QESNLIYPHVSEKPSRKGVVGQPRAFVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRL
SHGKVRSYGTPRRLAVVVENLNMKQMEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNV
LIDSLYRRTDGKTEYIYARVKESARFADEVLTEDLPTIISGISFPKSMRWNSNIVFSRPI
RWIFALHGDLIVPFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQER
KQRILHDSSILAEGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQ
KHQKYFPVTSKTMGNLLPCFITVANGAIKEEVVRKGNEAVLRARYEDAKFFYKMDTQKKL
SEFRDQLSSILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIKDAAALAMSDLAT
NIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTDPGIVLAVTDRLD
SLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLVAEEQPITIDSGV
IDEVVQFVTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEMEAFSRTEDFPKIV
EAYSRPARIIRGKEIGSALEVDASVFEKDEERALWSAYLEVADKIHPGVDIKAFADASLE
LLQPLEDFFTNVFVMAEDERVRNNRLALLTKVASLPKGIADLSVLPGF
NT seq 3207 nt   +upstreamnt  +downstreamnt
atggcgggtttggctccccctcccctcctcctcctccccctctcctcctcactctctcct
gccgccgcctcccaccacccaacctcccccccttctcgcacacgccgacgacgccgcctg
ctatccgccgtggcgtctgccgacggtgatgctccctccccagtctctgtctccgcctcc
gccgccaccaaggggccttcctcctcctccgtgctcaccttccagcaggccatccagcgc
ctccaggactactgggcctcagtggggtgtgccgtcatgcagtgcagcaatacagaggtt
ggagcagggaccatgaatcccttgacattcctcagggttttaggccccgagccatggaac
gttgcttatgtggagccaagtataagacccgacgacagccgctatggggacaatcctaat
aggcttcagcgtcatactcaatttcaggtaattttgaagcctgaccctggaaattcacaa
gacctctttctgcacagcctttcagcactaggtatcaatgtccgtgaacatgacatccgt
tttgttgaagacaactgggagagtccagttcttggtgcgtggggattaggctgggaggtt
tggatggatggcatggaaataacacagttcacatattttcagcagtcaggaagccttcca
ttgctgcctgtttctgttgagataacatatggacttgaacgcatcctcatgtctcttcag
ggtgtagatcatttcaagaatatacaatacactaaaggaattacatatggagaactattc
cttgagaatgagaaagagatgagtgcatattatttggagcatgcaaatgttgataacatt
caaaagcattttgatgattttgaagaagaggctcgctctttattatcactttggcttcct
attcctgcgtacgatcatgttctgaaggcctctcatgcttttaatattttagattctaga
ggctttgttggtgtaaccgagcgtgcaagatattttggtcgcatgcggagtcttgctcgc
cagtgtgctcagctttgggtgaaaacaagagagaacctcggttatcctttgggcacttat
caagagtctaatcttatctatcctcatgtctctgaaaagcctagtagaaagggagttgtc
ggacagccacgagcatttgttcttgaaataggaacagaagagttgccacctcatgatgtg
atagaagcaaccaaacagctggagaaatctttaattcaaatattggagaaacgaagactg
agccatgggaaagtacgctcttatgggacaccaaggagattagcggttgttgttgaaaat
cttaatatgaagcaaatggaggaagagattgaactacgtggtccacctgttgcaaaggca
tttgaccaagaaggaagacccactaaggctgctgaaggattttgtcgaaagaataatgtc
ctgatagatagtctatatagaagaactgatggtaaaacagaatatatctacgctcgggtc
aaagagtctgcacgttttgctgatgaggtactaactgaagatctaccgactattatatct
ggtatttcatttcccaagtctatgcgctggaactccaatattgtgtttagcaggccaata
cgctggatctttgcccttcatggggatctcattgtgccattttgctttgctggcatatca
agtgggaatcagtcgtgtggccttcgtaactcctccttggctaactttaaggtggaagct
gcagaattatatttacacaccctggagaaagctgggatcctgattgatatgcaggagcgc
aaacaacgaatcttgcatgactctagtatattggctgagggtgttggcggtgatatcatt
gcacctgatagcttggtgcaggaggttatcaatcttgtggaggcgccgatgcccattatt
ggtcgatacgatgtttccttcttagcacttccaaaggatgtattaataacggttatgcag
aaacaccagaaatatttccctgtaacctccaagaccatgggcaatctgctaccatgtttc
ataactgttgccaatggtgccattaaggaagaagtagtccgcaaagggaatgaagctgta
ctcagggcacggtatgaggatgctaaattcttttataagatggatacgcagaagaaactt
tctgaattccgagatcagctcagcagcattctctttcatgaaagacttggtaccatgctt
gacaaaatgaaacgtgttgagaacactgttgcagaagtggccctccttctcggaattaat
gagaaaatgatcccagcaatcaaagatgcagctgcattggctatgtcagatcttgccact
aatattgttactgaatttacttcacttgctggaattatggcacggcattatgctttgaga
gatggcctttcagaacagattgcagaagccctatttgagataacacttccaaggttctct
ggtgatgtgttcccaaaaacagatcctggcatagtccttgcagtcactgacagattggat
agtctagtgggtctgtttggagctggatgccaaccaagttctacaaatgatccatttggg
ctaaggagaatttcctatggattggttcaaatattggttgagaacaagaagaactttgac
ctcacgaaggccttgaccttagtggcagaggagcagccaataacaatagatagtggtgtt
atagatgaggtagtacaatttgtcacgcggagattggagcaacttttggtggatgaagga
attaattgcgagatagtccgttcagtgcttatagagcgtgcaaactgcccttatctagca
tcacaaacagcaattgaaatggaagcattttcaagaactgaagatttcccaaaaattgtc
gaagcgtactcaaggcccgcgagaataatacgtggaaaagaaattgggtctgctttagag
gttgatgcaagtgtatttgagaaagacgaagaaagagctttgtggagtgcctacttggag
gttgcggataagattcatcctggtgttgacataaaagcctttgcggacgcttctctggaa
ctgctgcaacccctagaagatttctttacaaatgtttttgtcatggcggaagacgagaga
gttcgtaacaatcggcttgcactgctaacgaaggttgcgagtctgccaaagggaattgcc
gacctgtcagttttaccagggttttag

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