Oryza sativa japonica (Japanese rice): 4339966
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Entry
4339966 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4339966
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4339966
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4339966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf_RING_Vps8
zf-Nse
zf-C3HC4_4
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-C3H2C3
EHMT1-2_CRR
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
4339966
NCBI-ProteinID:
XP_015640871
UniProt:
Q9LWV9
A3B7Y0
LinkDB
All DBs
Position
6:join(1540982..1541131,1541338..1541581,1541700..1541767,1541952..1541999,1542096..1542220,1542369..1542477,1542693..1542734)
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AA seq
261 aa
AA seq
DB search
MATVGQPDAMRRITVHYVNPPPIAGAGEAHVDGLDDEVLDYVIGDVLQDQEGLYQSILYG
KYGDDMRGARNTALAQSDGLHYYYHGENSSGEATTSRNSEIDQQIEYDLVFARQLQAMDN
LTIETPADEDDDISCVPSPSDSETDEPAEGNNEEAATQDDNDDPDNMTYEQRQALVESVG
NENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCI
ARWLKIDKACPVCKYEVFGPS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtggggcagcctgatgccatgagaaggatcaccgttcactacgtgaatccg
ccgccgatcgccggcgccggagaagcacacgtcgatggcctcgacgacgaggttcttgat
tatgtgattggtgatgttcttcaggatcaggagggtctgtatcaatcgatattgtatggc
aaatacggggatgacatgagaggggcaagaaacactgctcttgcccaatctgatggttta
cattactactatcacggagagaacagcagtggtgaagcaacaacctcgagaaattcagaa
atcgaccaacagattgagtatgacttggtgttcgctaggcagctgcaggcaatggataat
ctgacaattgagacacctgcagatgaagatgatgatataagctgcgtaccctctccatct
gactctgaaaccgatgaaccggcagaaggcaacaacgaagaggctgccacacaggatgat
aacgatgatccagacaacatgacatacgagcaaaggcaggcacttgtggaatctgtagga
aatgagaacagaggtttatctgatctgcttatctcctacttggagacatggaagtacaaa
tcaggctttttcccaaggaaggcaaaccatgataactgtcctatatgtctatccgctttc
agacgccgagaaacactcattacattggcttgcaagcatagttaccatgaaggttgtatt
gctagatggctcaagattgacaaggcctgcccagtttgcaaatatgaagtgtttggacct
tcctag
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