Oryza sativa japonica (Japanese rice): 4340047
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Entry
4340047 CDS
T01015
Name
(RefSeq) transcription initiation factor TFIID subunit 14b
KO
K11341
YEATS domain-containing protein 4
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
4340047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
osa03036
]
4340047
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
4340047
NuA4 complex
4340047
Chromatin remodeling factors
SRCAP complex
4340047
SWR1 complex
4340047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YEATS
pYEATS
FTA4
Motif
Other DBs
NCBI-GeneID:
4340047
NCBI-ProteinID:
XP_015641573
UniProt:
A0A0P0WSC7
Q5VPH6
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All DBs
Position
6:join(2147489..2147713,2148358..2148440,2148556..2148777,2148854..2149041,2149131..2149255,2150649..2150727,2150824..2150852)
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AA seq
316 aa
AA seq
DB search
MPQASSSSSPATAAAPPPPQPAADPSPSAVPASEEALDPQTPAPPPQAQPEAVLTAAQKA
LRSKPTRPPEDSDKKNKKLKDVEISFPIVYGTISFWLGKKASEYNSHKWTVYVRSATNED
LSVIVKRVVFQLHPSFTNPTRVVEQPPFELSESGWGEFEIAITLYFHSDVCEKRLDLFHQ
LKLYPEEDTGPQSTKKPVVVETYDEIVFPEPTEAFFQRVQNHPAATVPRLPPGITLPPPG
PMELVPHEKKRGDTKDHPLSQWFSNFSEADELLKLAAARQQVQAHIAKLRRQLSMIDGMP
QQSKAVSVQGQQFGHG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagcctcctcctcctcctcgccggcgacggcggcggcgccgcctccgccgcag
cctgcggcggacccttctccgtcggctgtgccagcttcggaggaggcgctggacccgcag
acgccggcgccgccgccgcaggcgcagccggaggccgtgctgaccgccgcgcagaaggcg
ctccgctccaagccgacgaggccgcccgaagactccgacaagaagaataaaaaactcaag
gatgtggagatcagtttcccaattgtctatggaaccatttctttctggcttggcaagaag
gcaagcgagtacaactctcacaaatggactgtgtatgttcgctctgcaacaaatgaggat
ttaagtgtgatagttaagcgtgtggtgtttcaacttcacccgagtttcactaatccaaca
agagttgtagagcaaccacctttcgagttgtctgaatctggctggggagaatttgaaatt
gcaataaccctttatttccacagtgacgtgtgtgaaaagcgtctggatttgtttcatcaa
cttaaactgtatccagaagaggacactggaccacaatcaactaaaaagcctgttgtcgtg
gaaacgtacgatgaaattgtcttccctgagcccactgaggcctttttccaacgagtacaa
aatcatccagctgctactgtgcctaggttgcctcctggtataaccttgcctcctccaggc
cctatggaacttgtgccacatgaaaagaagcgtggtgacactaaggatcatcctttgagc
cagtggttctcaaatttctctgaagctgatgaactattaaaactggctgctgctcggcaa
caggtgcaagctcacatagctaagctgagaaggcaattaagcatgatagatggaatgcct
cagcaatccaaagctgtttctgttcaaggccaacaatttgggcacggctaa
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