Oryza sativa japonica (Japanese rice): 4340105 Help Entry 4340105           CDS       T01015                                  Name (RefSeq) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism osa  Oryza sativa japonica (Japanese rice) Pathway osa00040   Pentose and glucuronate interconversions osa01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:osa00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     4340105 Enzymes [BR:osa01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      4340105 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Pectate_lyase_4 Beta_helix NosD DUF7933 Motif Other DBs NCBI-GeneID:  4340105 NCBI-ProteinID:  XP_015642201 UniProt:  Q0DEM3 LinkDB All DBs Position 6:join(2535863..2536554,2536653..2537007) Genome browser AA seq 348 aa AA seqDB search MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKGT LRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQHVIIH NVHIHHSVPHGGGMIRDSKRHYGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDGLIDAVS GSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRFGFFHVVNN DYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEWVWKSQGDVMM NGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC NT seq 1047 nt NT seq  +upstreamnt  +downstreamnt atggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgaccgg aagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgctggc aagatctacgtggtgaccgacgccagcgacgacgagatggtcatcccgaggaaagggacg ctccggtacggcgtgatccaggaccggccgatgtggatcgtgttcgcgcgcgacatgatc atccagctccggcaggagctgatcgtgaaccacaacaagaccatcgacggccgtggcgcg caggtgcacatcaccggcgcccagatcacgctccagggcgtccagcatgtgatcatccac aacgtccacatccaccactcggtgccgcacggcggcggcatgatccgcgactccaagcgc cactacggcctccgcacgcgcagcgacggcgacggcatctccatcatgtcctcctccaac atctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagc ggctccaccgccatcaccatctccaacggccacttcaccaagcacgaccacgtcatgctc ttcggcgccagcaacagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaac cacttcggcaagggccttgtgccgcgctgcaggttcggattcttccacgtcgtcaacaac gactacacgcactggctcatgtacgccatcggtggcaacatgaacccgacgatcatcagc caggggaacaggttcatcgcgcccgacgacttgaacgccaaggaggtgaccaagagggag tacacgccgtacgacgagtacaaggagtgggtgtggaagtcgcagggcgacgtgatgatg aacggcgccttctttaacgagtccggcggccagaacgagcgcagctacgaccagctcgac ttcatccctgccaagcacggcaagtacgtcggccagctcaccaagttcgccggcacgctc aactgccacgtcggcatgccatgctaa

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