Oryza sativa japonica (Japanese rice): 4340257
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Entry
4340257 CDS
T01015
Name
(RefSeq) syntaxin-132
KO
K08486
syntaxin 1B/2/3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4340257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4340257
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4340257
Membrane trafficking [BR:
osa04131
]
SNARE
Syntaxin (Qa)
Stx-PM
4340257
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
4340257
Exosomal proteins of other body fluids (saliva and urine)
4340257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Synaptobrevin
APC_N_CC
T2SSF
DUF2383
TDH
vRNAP_dom
Ribosomal_L19e
MG280
MCPsignal
Motif
Other DBs
NCBI-GeneID:
4340257
NCBI-ProteinID:
XP_015641400
UniProt:
A0A0P0WSV5
Q5WAA3
LinkDB
All DBs
Position
6:complement(join(3607989..3608147,3608256..3608321,3608393..3608473,3608572..3608649,3608729..3608754,3608858..3608918,3609112..3609154,3609247..3609320,3609442..3609530,3609636..3609684,3609920..3609976,3610058..3610174,3610848..3610865))
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AA seq
305 aa
AA seq
DB search
MRNLLTDSFELSKVDQAPANVDIELGLQGGMSSSAQPGFEGFFEQVREIEKLHETLTKLL
KDLQNSNEESKIVTKASAMKEIKKRMEKDVNEVTKTARLAKSKVEKLNKDNAANREKPGF
GKGSGVDRSRTTTTVSLTKRLRERISEFQTLREAIQKEYRDVVERRVFTVTGERADEETI
DKLIETGDSEQIFQRAIQEQGRGRVLDTLQEIQERHDAVKEIEQKLLELQQIFLDMSVLV
EAQGEILDNIESQVSGAAEHIQTGTNLLQKARFLQKNTRKWTCIGIVILLIIILIVVLSL
KPWSK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaccttctcacggattcgtttgagctcagcaaagtggaccaagcccctgcaaat
gttgatatcgagctagggttgcagggtggcatgtccagttctgcgcagcctggctttgaa
ggcttctttgaacaggtcagggagatcgagaagctacatgaaacattgacaaagttactg
aaggaccttcagaactcaaatgaggagtcaaaaattgttaccaaggcatcagccatgaaa
gagattaaaaagcgcatggagaaggatgtcaatgaggtgacaaaaactgcacgtctggca
aaatcaaaagtagagaagttgaataaagacaatgctgcaaacagagaaaaaccaggcttc
ggtaagggttcgggagtggacagatcccggactacaaccactgtctcattgacaaagagg
ttgagagaacggatatctgagtttcagacattaagagaggcaatccagaaggaataccgg
gatgtagtggagcggcgcgttttcactgtcactggcgagcgtgctgacgaagagacaatt
gacaagctgatagaaactggggacagtgagcaaatttttcagagagctattcaggaacaa
ggccgtggaagggtgcttgacactctccaagaaattcaggaacggcatgatgcagtgaaa
gagatagagcagaagcttcttgagctgcaacagattttcctcgacatgtccgtgttggtt
gaggctcaaggcgagatcctggacaatatagagtcacaggtttcaggtgcagctgaacat
attcagactggaacaaacctcctccagaaagcaagatttctgcagaagaacacacggaaa
tggacctgcatagggattgtcatcctcctcataatcatcctcatcgtcgtcctctcctta
aagccgtggtctaagtag
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