KEGG   Oryza sativa japonica (Japanese rice): 4340268
Entry
4340268           CDS       T01015                                 
Name
(RefSeq) uncharacterized LOC4340268
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03022  Basal transcription factors
osa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    4340268
  09124 Replication and repair
   03420 Nucleotide excision repair
    4340268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osa03021]
    4340268
   03400 DNA repair and recombination proteins [BR:osa03400]
    4340268
Transcription machinery [BR:osa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     4340268
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     4340268
SSDB
Motif
Pfam: MAT1 NAD_binding_9
Other DBs
NCBI-GeneID: 4340268
NCBI-ProteinID: NP_001408162
LinkDB
Position
6:join(3759459..3759532,3759634..3759707,3759809..3759912,3760000..3760068,3760951..3761217)
AA seq 195 aa
MVVASGGGRNAWAKEMTIRRRITSIFNKTREHFPSLKDYNDYLEEVEDMTFNLIEGIDVE
VIEAKIARYQQENAEQIYLSRAKRAEDLAAALKASRMNPGKAGANDTAAGSSQGISSGAG
VQEGQYAPAAVPGGLAQPRPTGMAPQPIGGSSVPLQGDDEETMRLRAESGARAGGWSIEM
CKRRALQEAFSTIFV
NT seq 588 nt   +upstreamnt  +downstreamnt
atggtggtggcatccggtggagggcggaacgcgtgggcgaaggagatgaccatccgccgc
aggattaccagcatattcaacaagacgcgggagcattttccgtccctgaaagattacaac
gactatcttgaggaagtcgaggatatgactttcaacctgatcgaggggatagatgtcgag
gtgattgaagctaaaattgccagatatcaacaggaaaatgctgaacagatatatttgtcc
cgggctaaaagggccgaagatcttgctgccgcacttaaagcaagcagaatgaaccctggc
aaggctggtgccaatgacacggctgctggaagctctcagggcattagtagtggcgcggga
gttcaggaaggccagtatgcgcctgctgctgttcccggtgggctagctcagcctcggcca
acagggatggcccctcaaccgatcggcggttcatcggttcctcttcaaggagatgatgag
gagaccatgaggctacgtgcggagagcggggctcgagctggtggatggtccatcgaaatg
tgcaagagaagagcattgcaggaagcgttcagtaccatattcgtctga

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