Oryza sativa japonica (Japanese rice): 4340278
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Entry
4340278 CDS
T01015
Name
(RefSeq) vesicle-associated membrane protein 711
KO
K08515
vesicle-associated membrane protein 7
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4340278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4340278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4340278
Membrane trafficking [BR:
osa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
4340278
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4340278
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Sigma_reg_N
Motif
Other DBs
NCBI-GeneID:
4340278
NCBI-ProteinID:
XP_015641118
UniProt:
Q9LWK1
Q0DE63
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All DBs
Position
6:complement(join(3937368..3937458,3938203..3938366,3938730..3938920,3939550..3939769))
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AA seq
221 aa
AA seq
DB search
MAILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTD
GITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYS
NDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF
RNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGFTLPTCIR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcctgtacgcggtggtggcgcgcgggacggtggtgctggcggagcacagcgcg
gcggcgaccaacgcgggcgccgtggcgcggcaggtcctcgagcgcctccccggcggggga
gccgacagccacgtctcctacacgcaggaccgctacgtcttccacgccaagcgcaccgac
ggcatcaccgcgctctgcatggccgacgaggccgccggacggcgaatcccctttgcgttc
cttgaggatatccatggaaggttcgtgaagacatatggccgtgctgcattgacatccctt
gcttatggcatgaatgatgagttctcgagggtcttgagtcagcaaatggattactattcg
aatgacccaaacgcagacagaataaatcgtatgaggggtgaaatcagtcaggtccgtact
gttatgattgacaatattgataaagtccttgaaagaggtgatcgtttggacatgttggtc
gacaagactgcaaatatgcaaggaaatacaattcgttttaaacgacaagctcgccgcttc
agaaataccacctggtggagaaatgttaaactcacgattgcgttgatattcctcctcacg
gtaataatatacgttgtgctcgtctttatgtgccatggcttcaccttgcctacttgtatt
aggtga
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