Oryza sativa japonica (Japanese rice): 4340299
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Entry
4340299 CDS
T01015
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00531
Glycosaminoglycan degradation
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
4340299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
osa00536
]
4340299
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
4340299
Glycosaminoglycan binding proteins [BR:
osa00536
]
Heparan sulfate / Heparin
Enzymes
4340299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
4340299
NCBI-ProteinID:
XP_015641662
LinkDB
All DBs
Position
6:complement(join(4088416..4088757,4088859..4088958,4089212..4089337,4089414..4089603,4089717..4089950,4090252..4090400,4090502..4090685,4090771..4090807,4090905..4091120))
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AA seq
525 aa
AA seq
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MEMRRFLGGLCFLALLRLGGAAEAVVGVAGVDGRRAIAATDEDFVCATMDWWPPDKCDYG
TCSWGLASLLNLDLSNKILLNAIRAFSPLKLRLGGSLQDKLVYGTGDGGGPCAPFVKNTS
EMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNGRVPLPDGSMGGPWDYTNAASLI
RYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVIALKSLVDTIYQGNPSKPLVLAP
GGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTHLIEKILNPSYLDGMVSTFSNLQ
GILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWFLDQLGMSAKYDTKSYCRQSLIG
GNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNGTNMIRTYAHCAKDSPGITLLLI
NLSGNTTSQVSVTSEGAHANTVKKHSRKTRHLAAGSMREEYHLTAKDGSLQSQVMLLNGR
ALVADENGEIPRLEPVKVDAAQPIAVAPYSIVFAHIHNFPAPACS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaggcggtttcttggtgggctatgcttcttggctctgctgcggctgggcggc
gccgcggaggccgtggtcggggtcgccggcgttgacgggcggcgcgccattgccgccacc
gacgaggacttcgtgtgcgcgacgatggactggtggccgccggacaagtgcgactacggc
acctgcagctggggcctcgcctccctcctcaacctggatctctccaacaaaatcttgctc
aatgccattcgagccttctcgccgttgaagctgcggctgggcgggtcgctgcaggacaag
ctggtgtacggcaccggcgacggcggagggccgtgcgcgccgttcgtcaagaacacgtcg
gagatgttcggcttcacgcagggatgcctgcctctccaccggtgggacgagctcaacgcc
ttcttccaaaaatccggcgcgagaatcgtgttcgggctgaacgctctcaacggccgggtt
ccgttgccggatgggtcgatgggagggccatgggattacaccaatgctgcatcgctgatt
cgttacaccgcgagcaagggttacaaaattcatggatgggagcttggaaatgaactcagt
ggcagtggagttggaacaaaagttggggctgaccaatatgctgcagatgtgattgcactg
aaatcactagttgacactatctaccaaggcaatccatcaaagccacttgttcttgctcct
ggaggtttctttgatgcaggctggtttactgaagttatagtcaaaaccaggccaaaccta
ctgaatgtggtcacccatcacatctacaacttagggccaggagtggacacacatctgatt
gagaagatcctgaatccatcttatcttgatggaatggtgagcacattcagcaatcttcag
gggatactgaaatctgccgggacttcggctgtcgcatgggtcggagagtccggaggcgcg
tacaacagcggccgccatcttgttaccgattcatttgtgttcagtttctggtttttggat
cagcttgggatgtcagcaaagtatgacacgaagagttactgcagacaaagtttgattggt
ggcaactatggcctgctaaacaaagaaacattccaaccaaatcctgactattacagcgct
ctactatggcatcgcctcatgggaaccaaagttctatctgcaacattcaatggcaccaac
atgattcgcacttatgcgcattgcgcaaaagattctccaggaataacactactgctgatc
aacctcagtggcaacaccacaagccaagtttcagtgacaagtgaaggtgctcatgcaaac
actgtgaagaagcatagcagaaagaccaggcatcttgcagctggatcaatgagagaagaa
taccatcttactgccaaagatggcagcttgcagagccaagtgatgctgctgaatggcagg
gcattggttgctgatgaaaatggggaaatccctaggctggagcctgtcaaagtggatgca
gcacagccaatagctgtggctccttactccattgtgtttgctcacatacacaatttccct
gcccctgcatgtagttag
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