Oryza sativa japonica (Japanese rice): 4340502
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Entry
4340502 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4340502
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4340502
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
4340502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zinc_ribbon_16
zf-RING_16
Prok-RING_1
Sporozoite_P67
PHD
zf-Nse
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
4340502
NCBI-ProteinID:
XP_015641420
UniProt:
Q69QB2
A0A0N7KLS2
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All DBs
Position
6:complement(6226319..6227647)
Genome browser
AA seq
442 aa
AA seq
DB search
MPTPRPRHRHHALPLALALAAPLLLLAAADGQPNESRDKNNGGGGGGFMAPSGGGGGMGS
QSPSFSAPMVVLLVALIAAFFFIGFFSIYIRRCGGEASTGPTIPAAALAALSRQEQRSRR
QRGLDPAVVESFPTMKYAEARELRDGGKDAVLECAVCLSEFDDDEELRLLPKCSHAFHPD
CIGEWLAGHVTCPVCRCNLAPDAAAAEANVVSGEVDGEQQEEEVVVAIDVDREGEEEDEE
RRREAMELERIGSQRRAVRSRSGRPLPLPRSHSTGHSLATTRLGDAGDLERFTLRLPEHV
RREMVAAAGEESLRRTAVREGRVGGGARSARIGRSDRWPSFIARTFSSRIPFWSASRRVL
DAAEAGADAAATTTTTTPTSTARTKRDKTAAAADGSVSSAKGSVRFDCLGGGGGGGGPSN
RVVAFANDDEEDDDEKPIARQV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcctcgtcctcgccaccgccaccatgcgctcccgctcgcgctcgcgctcgcc
gcgccgctgctgctgctagccgcggcggacgggcagccgaacgagtcgagggacaagaac
aacggcggcgggggaggtgggttcatggcgcccagcggcggaggcggcggcatgggctct
cagtcgccgagcttcagcgcgcccatggtggtgctcctcgtggcgctcatcgcggccttc
ttcttcatcgggttcttctccatctatatccggcggtgcggcggcgaggcctccacgggg
ccgaccatcccggccgcggcgctggcggcgctgtcgcggcaggagcagcggagccggcgg
cagcgcgggctcgaccccgccgtggtcgagtcgttccccaccatgaagtacgccgaggcg
agggagctccgcgacggcggcaaggacgccgtgctcgagtgcgccgtctgcctcagcgag
ttcgacgacgacgaggagctccggttgctgcccaagtgcagccacgccttccacccggac
tgcatcggggagtggctcgccggccacgtcacctgccctgtctgtcggtgcaaccttgcg
cccgacgcggcggcggcggaagcgaacgtcgtctccggcgaggtggatggggagcagcag
gaggaggaggtggtggtggccatcgacgtggaccgcgagggcgaggaggaggacgaggag
aggcggagggaggcgatggagctcgagaggatcggcagccagcgccgcgcggtgcggtcg
aggtcggggcggccgctgccgctgccgcggtcgcactcgacgggccactccctcgccacg
acgcggctcggcgacgccggcgacctcgagcggttcacgctgcgcctgccggagcacgtg
cgcagggagatggtcgccgccgccggcgaggagagcctgcgccgcaccgccgtccgggaa
ggccgcgtcggcggcggcgcccggagcgcgcggatcgggcggtccgaccggtggccgtcg
ttcatcgcgaggaccttctcctcgaggatcccgttctggtctgcgtcgaggagggtactc
gacgccgcggaggccggagctgacgccgccgccaccaccaccaccacgacgccaacgtca
acggcgaggaccaagcgtgacaagacggccgccgccgcagatggctccgtgagctcagcc
aagggcagcgtccgcttcgactgtctcggcggcggcggcggcggcggcggcccgagcaac
agagtcgtcgccttcgccaacgacgacgaggaggatgacgacgagaagccaatcgcccgg
caagtttga
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integrated database retrieval system
