Oryza sativa japonica (Japanese rice): 4340580
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Entry
4340580 CDS
T01015
Symbol
OsPIN1a, OsPIN1c, PIN1C
Name
(RefSeq) probable auxin efflux carrier component 1c
KO
K13947
auxin efflux carrier family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osa02000
]
4340580 (OsPIN1a)
Transporters [BR:
osa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
4340580 (OsPIN1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mem_trans
Motif
Other DBs
NCBI-GeneID:
4340580
NCBI-ProteinID:
NP_001408408
LinkDB
All DBs
Position
6:join(7034678..7035806,7035908..7036169,7036263..7036348,7036448..7036605,7036885..7036961,7037050..7037116)
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AA seq
592 aa
AA seq
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MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS
TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL
LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVVDAD
VVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTNAEI
YSLQSSRNPTPRGSSFNHTDFYSMVGRSSNFAAGDAFGVRTGATPRPSNYEEDAAAPNKA
GSKYGQYPAPNPAMAAPPKPKKAANGQAKGEDGKDLHMFVWSSSASPVSDVFGNGAEYND
AAAVKEVRMAVASPRKADGVERDDFSFGNRGVAERDAEAGDEKSVAAAVSGEHGKPGLTP
APTAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIILKSISIL
SDAGLGMAMFSLGLFMALQPRIIACGNKVATFAMAVRFLTGPAVMAAASIAVGLRGTLLH
VAIVQAALPQGIVPFVFAKEYSVHPDILSTAVIFGMLIALPITLVYYILLGL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgataacgggggcggacttctaccacgtgatgacggcgatggtgccgctgtacgtggcg
atgatcctggcgtacgggtcggtgaagtggtggcgcatcttcacgcccgaccagtgctcc
gggatcaaccgcttcgtggcgctcttcgccgtcccgctcctctccttccacttcatctcc
accaacaacccctacaccatgaacctccgcttcatcgccgccgacaccctgcagaagctc
atcgtcctcgcgctcctcaccctgtggagccacctctcccgccgcggctccctcgagtgg
accatcaccctcttctccctctccacgctgcccaacacgctcgtcatggggatcccgctg
ctgaaggggatgtacggggagttctccggtagcctcatggtgcagatcgtggtgctccag
tgcatcatctggtacacgctgatgctcttcatgttcgagtaccgcggcgccaggatcctc
atcaccgagcagttcccggacaccgcgggcgccatcgcgtccatcgtcgtggacgccgac
gtcgtgtcgctcgacgggcggagggacatgatcgagacggaggccgaggtgaaggaggac
ggcaagatacacgtcaccgtgcgccgctccaacgcgtcgcgctccgacgtctactcgcgg
cgctccatggggttctccagcaccacgccgcggccgagcaacctcaccaacgccgagatc
tactcgctgcagtcgtcgcgcaacccgacgccgcggggctccagcttcaaccacactgac
ttctactccatggtcgggcgcagctccaacttcgccgccggggacgcgttcggggtgcgc
accggcgccacgccgcggccgtccaactacgaggaggacgcggcggcgcccaacaaggcc
ggcagcaagtacgggcagtacccggcgcccaacccggccatggcggcgccgcccaagccc
aagaaggcggccaacggccaggccaagggcgaggacggcaaagacctccacatgttcgtc
tggagctccagcgcgtcgcccgtgtccgacgtcttcggcaacggcgccgagtacaacgac
gccgccgccgtcaaggaggtccgcatggccgtcgcctcgccgcgcaaagcggacggcgtg
gagagggacgacttcagcttcgggaacagaggcgtcgccgagagggacgcggaggccggc
gacgagaagagcgtggcggcggcggtgtcgggtgagcatggcaagcctggcttgacgccg
gcgccgacggcgatgccgccgacgagcgtgatgacgcggctcatcctgatcatggtgtgg
cgcaagctcatccgcaaccccaacacctactccagcctcatcggcctcatctggtcgctc
gtctgcttccggtggaacttcgagatgccggcgatcatcctgaaatccatctccatcctc
tccgacgccggcctcggcatggccatgttcagcctcgggctgttcatggcgctgcagccg
cggatcatcgcgtgcgggaacaaggtggcgacgttcgccatggcggtgcggttcctgacc
ggcccggccgtcatggccgccgcctccatcgccgtcggcctccgcggcacgctcctccac
gtcgccatcgtgcaggcagcgttgccacagggcattgtccccttcgtcttcgccaaggag
tacagcgtgcaccccgacattctcagcacggcggtcatctttggcatgctcatcgcgctg
cccatcacgctggtgtactacatcctgctggggctgtga
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