Oryza sativa japonica (Japanese rice): 4340683
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Entry
4340683 CDS
T01015
Name
(RefSeq) MYB-like transcription factor ODO1
KO
K09422
transcription factor MYB, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4340683
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
4340683
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
4340683
NCBI-ProteinID:
XP_015642105
UniProt:
Q652E6
A3BAE6
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All DBs
Position
6:join(8420474..8420606,8420703..8420832,8420927..8421467)
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AA seq
267 aa
AA seq
DB search
MGRQPCCDKVGLKKGPWTAEEDQKLVAFLLTHGHCCWRVVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGLLSDDEERLVIDLHAQLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLRKMG
IDPVTHQPLEPPRPPPREQDATPPPPPPPPQEIEESEEEEQEPSPLIEPHEITAPPPAAA
AEAATSNCSVSPASVLSPSCSSSASAASAVDVAEWPEPMYMFGMDGIMDVGWNGLISGAG
VDVDVDVDPFDHYYHDASFDDQDVWII
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcagccgtgctgcgacaaggtggggctgaagaaggggccgtggacggcggag
gaggaccagaagctcgtcgccttcctcctcacccacggccactgctgctggcgcgtcgtc
cccaagctcgcagggttgctgaggtgcgggaagagctgcaggctgaggtggaccaactac
ctgaggcccgacctcaagaggggcctcctctccgacgacgaggagcggctcgtcatcgac
ctgcacgcgcagctcggcaacaggtggtccaagatcgcggcgcggctccccgggaggacg
gacaacgagatcaagaaccactggaacacacacatcaagaagaagctccgcaagatgggc
atcgaccccgtcacccaccagccgctggagccgcctcgtcctccgccgcgcgagcaggat
gccacgccgccgccgccgccgccgccgcctcaggagatcgaggagagcgaggaggaggag
caggagccttcgccgttgatcgagccgcacgagatcaccgcgccaccgccggcggccgcg
gccgaggccgccacgagcaactgctctgtttcccctgcttcggtgctctccccgtcctgc
tcctcgtcggcgtcggctgcctcggcggtggacgtggcggagtggccggagcccatgtac
atgttcggcatggatggcatcatggacgtcggctggaacggcctcatctccggcgccggc
gtggacgtcgacgtcgacgtcgacccgttcgaccattactaccacgacgccagcttcgac
gatcaagacgtctggatcatctga
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