Oryza sativa japonica (Japanese rice): 4340716
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Entry
4340716 CDS
T01015
Name
(RefSeq) autophagy-related protein 2
KO
K17906
autophagy-related protein 2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
4340716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4340716
03029 Mitochondrial biogenesis [BR:
osa03029
]
4340716
Membrane trafficking [BR:
osa04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
4340716
Mitochondrial biogenesis [BR:
osa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
4340716
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
EAD11
Motif
Other DBs
NCBI-GeneID:
4340716
NCBI-ProteinID:
XP_015643194
LinkDB
All DBs
Position
6:join(9066808..9066993,9067851..9068887,9069329..9069477,9070328..9070581,9070676..9073690,9073780..9073892,9074866..9075055,9075290..9075403,9075482..9075589,9075832..9075964,9076097..9076299,9076517..9076713,9078318..9078378)
Genome browser
AA seq
1919 aa
AA seq
DB search
MNFFSGVWVRTMMKRLCKSLLKKRLGDLILGDLDLDQFDLQLTRGTLHLSDIALNADFVN
RKLSGSAIMMKEGSIKSLLVRIPLLLNMRDCCEIVVEDLELVLAASVSSEDPSGDTECSV
SGSNTDDTQKSVQAKRNESDGNQCSTSASRDVDKGVQRIANAVTCFLTNFNIKLKNSYVV
FDPQNILDNKVPEFNRSLVFRIKETEFGTNLSTDGIIKLHNFVTFHEAVIEFLKMDDVDA
HALLQDDLDRGPADISSGHSTTAVLTGPIGGFSGKLNLSIPWNGLNFKKLDADISLNSLE
LRLQLSSIQWLMDVWDSLQRRNLVHEQSYAHNTADISRSASSYVSSSSKSGSGSVIASRE
HLTEDTFSQLRQEKTQEPSLTMPYLIPDWIPVLIHEDHGDPDSVCDESIDQFFECFEELM
NSQTNLGNSGIWDWTCSVFNAITFVSTLASGSDQIPKEPPIEKTLRASIAEISVVLLFSD
EMDAGNSSVPISQFNDMRNSEMFSSCLSFAHFEQSMISPAPAASLNMHHVEAKCQNIHLS
LETYPENLSLKGSIAAIKLDEYYGSKNNDSDHPNLGAAFLNNNFCREVQASLPQSVFAYQ
DYHEETSRRHTNNSNDLTKVELLNTFGECVFHYDVSSSGQDGNPVSSTSLSVCLAPLVCW
VHFHTIYMLLNFISKIESDVLHGEDKIHRKNDEKNVNLSMKSNVSLGGSQKVQIALSPAR
VIFCFPSESWDLSCPSMLDKFLVIDHTPSLKSGADSSPHQNEMPNDVNAITPSTLVHLAT
GNFDIYLVRPVNDELNARTCSLSRQTFSSLKIFSVTGSNCHETGITMLWKKYPLKDPEMV
SKTWSLPNLHEQKIAQNKNGKWVGVSSSTTSEDLEESSSSIRRELLRSTEFLLHIKLSCV
SVHLSKKDCGILNHLLKNILDGLSDGATGNFENDSDNCMPIHDTASQTSVIFECSILDIC
TELDETVEVGPLLQTELEGSWNCLKLSISKFSLLSSSNVGGVNNANFLWVNHGEGELWGS
ITGTDDYEESKDVLLVVCKDSASRRGDGEGSNILSFGTAGCSVTHIMNPKFQKNYTSINV
RSATAVAPGGRMDWISAICLLFSSASDGTEQPANSSTMNDSQGGEPFSSLFFLELVDVAV
SYEPHFRSSALSAETPDCKYFSCLLAASLFKLHSKSASNSTATDFDIELRDLGVLICGSS
SFKNVSCGYGADYLRRMGYAKIVQNTFIEAVLRIDTSFWKLELSDSQFDIGTCHDTTHGV
IQLCSQLQQLYAPDMRDALDHLQSRWNSVQQANKQNMGTDVSEKSESSIDNLTDSEECKS
DGLLDDIIENAFCTDQDFASYSLSGSEMDEEFGLSKAIPEANDACISLESLLVTPEASTS
DDLIIESYYMPPSSSSTLYNEDQGNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQI
FQQKLKPAIFILNSDESCSLKGKVLIHDIDVKWRMYEGNDWKLAQKDTISRPCSNGRDKR
SYLEFIMSALNIQFNMYPDGDIFVSKLSISAKDINICDQSTHAPWKMVLGCYNSKDYPRE
SCSSAFMLELESVRPEPQAPLEDYRLHLEILPLQLHLDQGQLNFLISFFQNDLCNNPNLA
CENENIDAQSTMYRSDTIADEALLPFFQKFDVKPLVLHINYIPRHFDPVALSKGNYAELL
NIFPWKGIDLKLKQVSAMGVYGFNNICEIVAAEWLEDISKNQVHKLLKGLPPIKSLVAVS
SGTKKLVSLPIKSYKKDRKLLKGMQRGAVAFIRSVSIEAVGLGVHLAAGAHDMLLKTESA
LTAIPPPLASREAKRTKDNVRANQPESAQEGLKKAYESLTDGFGRTASALIGNPIKVYNR
GAGAGSALATAICGAPGAAVAPLSASFRAAHYTLLGIRNSLDPERKKESMYKYHGPPQL
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcttctcgggggtatgggtgaggacgatgatgaagcggctgtgcaagtcgctg
ctgaagaagcggctcggggatctgatcctgggggacctcgacctcgaccagttcgacctg
cagctcacccgcggcacgctccacctctccgacatcgccctcaacgccgacttcgtcaac
cgcaagttgtcaggatctgctatcatgatgaaggaaggatcgataaaatccctgctagtt
agaattcctctactattaaacatgcgcgactgttgcgagattgtcgtggaggatttggaa
cttgtgcttgctgcatctgtttctagcgaagatccttctggtgatactgaatgctctgtt
tctggtagtaatactgacgacacacagaaatcagtccaggccaaaagaaatgaatctgat
ggcaatcagtgttctacctctgcatctcgagatgtcgacaaaggtgtccagaggatagct
aatgctgtcacatgttttcttaccaactttaacatcaagttaaaaaactcttatgttgta
tttgatcctcaaaacattttggataacaaggtcccagaatttaatcgatcactggttttc
cgaatcaaagagaccgaatttggaaccaatctttcaacagatggtataatcaaacttcac
aattttgtgacattccatgaggcggtcattgagtttttgaagatggatgatgttgatgcg
catgcacttcttcaggatgatttggatagaggaccagcagacatttcatcaggtcatagc
actaccgcggtcttgacaggtcctatcggtggattctcagggaaattgaacttaagcatc
ccatggaatggcttgaactttaagaaacttgatgcagatatatctcttaattcattagaa
ttgcggttacaactgagcagtatccaatggctcatggatgtgtgggattctctccaaaga
agaaatctagtacatgaacagagttatgcccataataccgcagacatatctagatctgcc
agttcatatgtatcaagctcttcaaaatcaggttcaggttctgtgatagctagcagggaa
catttgacagaggacacattttctcaactcaggcaagaaaaaacacaagagccttccctg
actatgccatacttgattccggactggattccagtgcttatccatgaggatcacggtgac
cctgattcagtttgtgatgaaagcatcgaccagttctttgaatgttttgaggaactgatg
aactcccagactaatctgggaaacagtggcatatgggattggacatgttcagtgttcaat
gcaattacctttgtatccactttagcttctggatcagatcaaattcctaaagaaccgccg
atagagaaaaccttgcgggcttccattgctgagatatctgttgttcttttgttcagtgat
gaaatggatgctggcaattccagtgttcctatcagtcaattcaatgacatgagaaattct
gaaatgttttcaagctgcctttcctttgcacattttgagcaatcaatgatatctcctgct
cctgctgccagcttgaatatgcatcacgttgaagccaagtgtcagaacattcatctttcc
ctggagacatatcctgaaaacctaagtctcaagggatcaattgctgctataaagcttgat
gaatactatggcagtaagaacaatgattcagatcatccaaatcttggtgctgctttcttg
aacaataatttttgcagagaagttcaagcttctctccctcaatctgtatttgcttatcaa
gattaccatgaggaaacatcacgccgtcataccaacaattcaaatgacctcactaaggtc
gaattgctaaacacgtttggtgagtgcgtattccactatgatgtcagttcctcaggtcaa
gatggcaacccagtaagctcaacttcactatcagtctgtttggctcctttggtttgctgg
gtgcactttcacacaatatatatgctactgaattttatcagtaaaatcgagtctgatgtt
ttgcatggggaggataaaattcataggaagaatgacgaaaaaaatgtcaatttgtctatg
aagtcaaatgtttctttgggaggaagccaaaaggttcagatagccctgtcgcctgcaaga
gtcatcttttgctttccttctgaatcatgggatttgagctgcccatccatgctggataag
ttccttgtcattgaccacacaccatctctgaaatcaggagcagattcatctccacatcaa
aatgaaatgcctaatgatgtcaatgcaatcacaccatctactttggtccatttggctaca
gggaactttgacatctatttggttagaccagttaatgatgaactgaatgctagaacctgt
tctctgagtaggcaaactttctcttctctgaagattttctctgttaccggatccaattgt
catgaaactggcattacgatgctctggaagaagtatcctttaaaagaccctgagatggtg
agcaaaacttggagtttgccaaacctgcatgagcaaaagattgctcagaacaaaaatggt
aaatgggttggtgtttcctcttctacaacctcagaagatcttgaggaatcaagttccagt
atacgcagggagctcctccggagcacagagtttttgttgcacattaaactttcttgtgtc
tcagttcatctcagtaagaaggactgtgggatactaaaccatttgctaaaaaacatcctt
gatggtctttcagatggagcaactggaaattttgaaaatgacagtgacaattgtatgcca
atccatgatactgctagccaaacatctgtcatttttgaatgcagcatcttggatatctgc
actgaattggatgaaactgttgaagttggtcctttattgcagactgaactagaaggttcc
tggaactgtctcaaattgtcaatttcaaaattttctctgctatcctcttctaatgttggc
ggggttaacaatgccaattttctttgggtcaatcatggtgaaggtgagctctggggctct
attactggtacggatgactatgaagaaagcaaagatgttcttctagttgtttgcaaggat
tcggcaagtagacgaggtgatggtgaaggtagcaatatcttgtcttttggaactgcgggc
tgttctgtgactcatatcatgaacccaaagtttcagaagaattatacttctatcaatgtt
cgttctgcaacagccgttgcacctggtggccgcatggattggataagcgcgatttgccta
ttgtttagttcagcttcagatggaactgaacaaccagctaatagtagcacaatgaacgat
tcccagggtggtgaacctttttcatcactgttctttcttgagctggttgatgttgctgtg
agctatgaacctcatttcagaagttctgcactcagcgctgaaactccagactgcaaatac
ttttcatgccttttagctgcatcattgtttaaacttcacagcaaatctgcatcaaactct
acagctactgattttgatatcgagctgcgagatctcggggttctcatttgtggatcctct
agttttaaaaatgtcagttgtggctatggtgcagattacctccgtcggatgggctatgct
aagattgtgcagaatacattcattgaagctgttctaagaattgatacttccttttggaaa
ctcgaattatcagactcgcaattcgatattggtacttgtcacgatacgacacatggtgtt
attcaattgtgctcccagcttcagcagctatatgctccagatatgcgggatgctttagat
catctacaatccagatggaatagtgtccaacaggcaaacaagcaaaatatgggcactgat
gtgtcagaaaagtcagagagtagcattgataatctgacagattcagaggagtgcaagtca
gatggtttgcttgatgatataattgagaatgccttttgcactgaccaggacttcgcaagc
tactcattgagtggtagcgaaatggatgaagagtttggcctgagtaaggccatcccagag
gcaaatgatgcctgtatttcacttgaatcattactagttacccctgaagccagtactagt
gatgatctaataattgaatcttattatatgccaccttcgtcatcatcaactctatacaat
gaagaccagggcaattgtgctcctagaaccgtagagtgtgacgaaggtgaatggtataat
aattttcccacaatagatgaaaaccatgttcaaaggaacaaaccacgagaagagcaaata
tttcaacaaaaactgaagcctgctattttcatcttgaattctgatgaatcgtgcagtctg
aaaggaaaggttcttattcatgatatagatgtcaagtggcggatgtacgagggaaatgac
tggaaattagctcagaaagatacgattagccggccgtgctcaaatggcagagacaagagg
tcttatttagagtttattatgtctgcgctcaatatccagttcaatatgtatccagatggg
gatatttttgtttctaagctatccatctctgccaaagacatcaatatttgcgaccaaagt
acacatgctccatggaaaatggttcttggttgctacaactcaaaggattacccgagagaa
tcttgttctagtgcattcatgttagaactggagtctgtaagacctgaaccacaggctcct
ttggaagattacaggttacatcttgagattttgcctctacagttgcatcttgatcaaggg
caacttaacttccttatcagtttcttccagaatgacttgtgcaacaaccctaatttggct
tgcgaaaatgagaatattgacgcgcagagtacaatgtatcgaagcgatacaattgctgat
gaggcattacttcctttctttcagaaatttgatgtgaagcctcttgttctgcacattaat
tatattcctcggcattttgatcctgttgcacttagcaaaggaaattatgcagaacttctc
aacatttttccatggaagggaattgatttaaagctgaagcaggtttctgccatgggtgtt
tatggtttcaataatatatgtgaaatagtagctgcagaatggttagaggacatctcaaaa
aatcaggtccataaattgttaaaagggcttccacctataaaatcattagttgctgtgagt
tcaggcactaagaaattggtctctttacccataaagagctataagaaggatcggaagttg
ctcaagggaatgcaaagaggtgcggttgctttcattagaagtgtttccattgaagctgtg
gggcttggtgtacatttggcggcaggagctcatgatatgcttctaaagacagaaagtgcc
cttacagcaattccaccacctttagcctcacgtgaagcaaaaagaaccaaagacaatgta
agagctaaccagcctgaaagtgcgcaagaagggctgaagaaggcatatgaaagcttgacc
gatgggtttggaaggactgcctctgctttgattggaaatcctattaaagtttataatcgt
ggggctggtgccggatcagctttggctactgcaatctgtggagctccaggtgctgcagtg
gctccattatcagcgtcttttcgtgctgcacattatacacttcttggtataaggaatagc
cttgatcctgaacgcaagaaagaatctatgtacaaataccacgggcctcctcaattgtag
DBGET
integrated database retrieval system
