Oryza sativa japonica (Japanese rice): 4340767
Help
Entry
4340767 CDS
T01015
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
osa01003
]
4340767
Enzymes [BR:
osa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
4340767
Glycosyltransferases [BR:
osa01003
]
Polysaccharide
Structural polysaccharide
4340767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
4340767
NCBI-ProteinID:
XP_015641244
UniProt:
Q5VNG4
Q0DCW1
LinkDB
All DBs
Position
6:complement(join(10260331..10260574,10260760..10260917,10261038..10261242,10261371..10261660,10261792..10261957,10262059..10262147,10262247..10262314,10263372..10263678))
Genome browser
AA seq
508 aa
AA seq
DB search
MGWKAAMVGGKLAGVGGEKLRCAAAPAAAARSRMKLWMVRATTTVLLWTCVVQLTAVGDT
WGPRVLKGWPSCITSPDDDAASATLAAARPEPVVDKAVLPPKRIYRNNGYLMVSCNGGLN
QMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFITSLRDEVRILREL
PPRVKRRVEHGMYHSMPPISWSDISYYHNQILPLIRKYKVLHLNRTDARLANNGLPMEIQ
KLRCRVNYASLRFTSQIEELGKRVIRILRQNGPFLVLHLRYEMDMLAFSGCTQGCSNEEA
DDLTRMRYAYPWWKEKIINSELKRKDGLCPLTPEETALVLRALDIDRSMQIYIAAGEIYG
GKRRMSALTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMA
KVVEGHRRYMGFKKTILLDRKLIVELVDQYNNSSLRWDEFSLMLKAAHANRMGSASKRTV
ILDRPKEEDYFYANPQECLQDSNLLHTS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaaggcggccatggtggggggtaagttggccggcgtcggcggcgagaagctc
aggtgcgccgcggcgcccgccgcggcggcgcggtcgcggatgaagctgtggatggtgcgc
gccaccaccacggtgctcctctggacctgcgtcgtgcagctcaccgccgtcggcgacacc
tggggcccccgcgtgctcaagggctggccctcctgcatcacctcgcccgacgacgacgcc
gcctccgccacgctcgccgccgcccgcccggagcccgtcgtcgacaaggccgtgctaccg
cccaaaagaatttataggaacaatggttatctgatggtctcatgtaatggtggacttaat
caaatgcgagctgcaatatgcgacatggttgtaattgcgagatatttgaatgtcactttg
gttgtgccagagttggataagacatcattttggaatgatccaagtgagttccaagatata
ttcgatgttgaacactttataacctctttaagagatgaagttcgcatattgagagaactg
cctccaagggtaaaacgaagagttgaacatgggatgtaccactcaatgccaccaataagt
tggtctgatatctcctattaccataaccagattctccctttgatacggaagtacaaggtt
ctccatttgaacagaactgatgctaggctagcaaacaatggtttacctatggagattcag
aaactgcgttgccgagtaaactatgcctccttgagattcacttcgcaaattgaggagttg
ggaaagagagtaattaggatactccgccaaaatggccctttcttggttcttcacttacgt
tatgaaatggatatgctggctttctctggctgtacacaaggttgcagtaatgaagaagca
gacgacctcacaagaatgaggtacgcttatccatggtggaaggagaaaattataaattca
gaattgaaaagaaaggatggtctttgcccattgacgccagaggagactgcccttgtcctc
agggcattggacatcgatagaagcatgcaaatatatattgcagctggagaaatatatggt
ggaaagcgcagaatgtctgctctcacttcagcgtatcctaatgtggtgaggaaagagaca
cttttggaaccttctgatctaatgttcttccagaaccactcatcacaaatggcagcacta
gattacttggtttctttggaaagtgacatctttgttcctacatatgatggcaatatggct
aaagttgtcgagggtcatcggagatacatggggttcaagaagacaatcttgttagaccga
aaacttattgttgagctagtagatcaatacaacaacagttctttgcgatgggatgagttc
tctttaatgctcaaggctgcccatgcaaaccggatgggatcagcttcaaagaggacggtg
attcttgacagacctaaggaagaggactatttttatgccaatccccaagaatgcctgcaa
gattctaatctcttacatacatcatga
DBGET
integrated database retrieval system
