Oryza sativa japonica (Japanese rice): 4340862
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Entry
4340862 CDS
T01015
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4340862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4340862
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4340862
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
4340862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_2
zf-RING_14
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
4340862
NCBI-ProteinID:
XP_015641377
UniProt:
Q0DCM6
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All DBs
Position
6:join(12050850..12051149,12052895..12053560)
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AA seq
321 aa
AA seq
DB search
MAKFTLDDADDDPPVATARDKRKRDDGPADAEDEPPRARGSAVAGREPAAPGAEAEAAGR
RGPAEEMANGEVEGGLSVQIDPDVLDCSICFESLRPPLYQCQNGHVACFSCWSKLSNKCH
ICSRDAKFARNIALEKIVESIKSSCSYAKWGCCKFINYAQRDAHEEACLFAPSVCPISNC
GYRGFTGRWSGHFLTSHSSDVMRFIYGQPFEVNIEVSVPFLVFLGEDDHLFLLQNNNLTP
FGHAFSVVCLRSGNLNWMFSYQIEATSRKKPENRLQLKASVTNTRQWTGIYPSEAFLLVP
FDFCHSSNIVLNISIERYAVV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttcaccctggacgacgccgacgacgaccctcccgtcgctaccgcccgcgac
aagaggaagcgcgacgatggccccgccgacgccgaggacgaaccccccagggcccggggt
tcggcggtcgcgggccgcgagccagcggcgcccggcgcggaggcggaggcggccgggcgg
cgcgggccggcggaggagatggccaacggggaggtcgagggtggcctcagcgtgcagatc
gaccctgacgtgctcgactgctccatctgcttcgagtccctccgccctcccctctaccag
tgccaaaatggccatgtagcatgcttttcctgctggtccaagctcagcaataagtgtcac
atttgttctcgcgatgccaaatttgctcgaaatattgcattggagaagattgttgagtca
atcaagtcctcttgctcatatgcaaagtggggttgctgcaagtttatcaactacgcacaa
agagatgctcatgaagaagcttgtctttttgctccttcagtgtgcccaatctctaattgt
ggatatagaggattcactggacgttggtcaggacacttccttaccagccatagttcagat
gttatgaggttcatctatggtcagccttttgaagtaaatattgaggtatcggtgcctttt
ctggtttttcttggagaggatgaccaccttttccttctccagaacaataacctgacgccc
ttcgggcatgcgttttcagtagtttgtcttaggagtggcaatctaaattggatgttctcc
taccaaattgaagcaactagtagaaagaaacctgaaaatagactgcaactgaaggcttct
gtcacaaatacaaggcagtggacaggtatttacccttcagaagctttccttttggtaccg
tttgacttctgccattctagcaacatagtactcaatatctccattgagagatatgccgtt
gtatga
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