Oryza sativa japonica (Japanese rice): 4340884
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Entry
4340884 CDS
T01015
Symbol
MKRN, OsC3H41, OsJ_21146, P0592B08.7
Name
(RefSeq) E3 ubiquitin-protein ligase makorin
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4340884 (MKRN)
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4340884 (MKRN)
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4340884 (MKRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_2
zf-CCCH_9
IBR_1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
4340884
NCBI-ProteinID:
NP_001408523
LinkDB
All DBs
Position
6:join(12537064..12537077,12538352..12538439,12538538..12539349,12539583..12539652,12541111..12541199,12541275..12541308)
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AA seq
368 aa
AA seq
DB search
MSTKRVLCKFFMHGACLKGEYCEFSHDWNDQPNNVCTFYQKGSCSYGSRCRYDHVKVSRN
PTVAPPPSSSTTTRASSSLQPLSFGRPHHVGYQADSSNPRQQISMDVLAHSGSKPVWRND
FQHESVLEDGIDWSISPTVQNQTTLSPADLPICSFAAGGNCPYGEECPQMHGDLCTTCGK
MCLHPYRPDEREEHTKLCEKNHKRLESLKRSQEIECSVCLDRVLSKPTAAERKFGLLSEC
DHPFCISCIRNWRNNSPTSGMDVNSALRACPICRKLSYYVIPSVLWYFSKEEKLEIIDNY
KAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYRDGRLEEVILRHLDADDGSTVIAKNIRLS
DFLSRLHL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccaagagggttctttgcaagttcttcatgcatggagcttgcttgaaaggagag
tactgtgagttctcccatgattggaatgatcaaccaaacaatgtttgcacgttctaccag
aaaggttcatgctcgtatggtagccgttgccgatatgaccatgtcaaagtttctcgtaac
cccacagtggctccaccaccaagctcaagtactacaacacgtgcatctagttctcttcag
cctttgagtttcgggcgccctcaccatgtggggtaccaagcagattcaagcaacccaagg
caacagatatctatggatgtgctggcacattctggaagtaagcctgtatggagaaatgat
tttcaacatgaaagtgtacttgaggatgggattgactggtcaataagtccaactgtgcaa
aaccagacaaccttgagtcctgctgatctgccaatctgttcttttgctgctggtggtaat
tgtccttatggggaagagtgccctcagatgcatggagatctgtgcacaacctgtgggaaa
atgtgcttacatccttatcgtcctgatgagagggaggaacataccaagctatgtgagaaa
aaccacaagcgtcttgagtctttgaaacgtagccaagagatagaatgcagtgtctgcctg
gaccgtgtgctctcaaagcctactgctgctgaaaggaagtttggactcttatctgagtgt
gatcatcccttctgtatttcatgtattagaaattggcgtaacaattctcctacgtctgga
atggatgtgaactcagcactgagggcttgtccaatatgtcgcaaactttcatactatgtc
attccaagtgttctttggtacttttcgaaggaggaaaagctggagattattgacaactat
aaagccaaactcaagtctattgactgcaagtacttcgattttggaactggtacttgtccc
tttgggtcaagctgtttctacaagcatgcctacagagacggacgcttggaagaggtcata
ctgcgacatcttgatgctgacgatggaagtacagtgattgccaaaaatattaggttgtcg
gacttcctcagtcggttacatctttag
DBGET
integrated database retrieval system
