Oryza sativa japonica (Japanese rice): 4340977
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Entry
4340977 CDS
T01015
Symbol
GLK1, OsGLK1
Name
(RefSeq) probable transcription factor GLK1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4340977 (GLK1)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
4340977 (GLK1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
ORC_WH_C
Motif
Other DBs
NCBI-GeneID:
4340977
NCBI-ProteinID:
NP_001389733
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All DBs
Position
6:join(14263507..14264052,14264141..14264281,14265819..14266169,14266289..14266348,14266479..14266598,14266787..14266936)
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AA seq
455 aa
AA seq
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MLAVSPAMCPDIEDRAAVAGDAGMEVVGMSSDDMDQFDFSVDDIDFGDFFLRLEDGDVLP
DLEVDPAEIFTDFEAIATSGGEGVQDQEVPTVELLAPADDVGVLDPCGDVVVGEENAAFA
GAGEEKGGCNQDDDAGEANVDDGAAAVEAKSSSPSSTTSSSQEAESRHKSSSKSSHGKKK
AKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHMIA
REAEAASWTQRRQIYAAGGGAVAKRPESNAWTVPTIGFPPPPPPPPSPAPIQHFARPLHV
WGHPTMDPSRVPVWPPRHLVPRGPAPPWVPPPPPSDPAFWHHPYMRGPAHVPTQGTPCMA
MPMPAARFPAPPVPGVVPCPMYRPLTPPALASKNQQDAQLQLQVQPSSESIDAAIGDVLS
KPWLPLPLGLKPPSVDSVMGELQRQGVANVPPACG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgtgtcgccggcgatgtgccccgacattgaggaccgcgccgcggtggccggc
gatgctggcatggaggtcgtcgggatgtcgtcggacgacatggatcagttcgacttctcc
gtcgatgacatagacttcggggacttcttcctgaggctggaggacggtgatgtgctcccg
gacctcgaggtcgacccggccgagatcttcaccgacttcgaggcaatcgcgacgagtgga
ggcgaaggtgtgcaggaccaggaggtgcccaccgtcgagctcttggcgcctgcggacgac
gtcggtgtgctggatccgtgcggcgatgtcgtcgtcggggaggagaacgcggcgtttgcc
ggggctggagaggagaagggagggtgtaaccaggacgatgatgcgggggaagcgaatgtc
gacgatggagccgcggcggttgaggccaagtcttcgtcgccgtcatcgacgacgtcgtcg
tcgcaggaggctgagagccggcacaagtcatccagcaagagctcccatgggaagaagaaa
gcgaaggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctc
ggcatcgacaaggccgtgccgtcgaggatacttgagatcatggggatcgactctctcacc
cggcacaacatagccagccatcttcagaagtaccggtcacacagaaaacacatgattgcg
agagaggcggaggcagcgagttggacccaacggcggcagatttacgccgccggtggaggt
gctgttgcgaagaggccggagtccaacgcgtggaccgtgccaaccattggcttccctcct
cctccgccaccaccaccatcaccggctccgattcaacattttgctcgcccgttgcatgtt
tggggccacccgacgatggacccgtcccgagttccagtgtggccaccgcggcacctcgtt
ccccgtggcccggcgccaccatgggttccaccgccgccgccgtcggaccctgctttctgg
caccacccttacatgagggggccagcacatgtgccaactcaagggacaccttgcatggcg
atgcccatgccagctgcgagatttcctgctccaccggtgccaggagttgtcccgtgtcca
atgtataggccattgactccaccagcactggcgagcaagaatcagcaggacgcacagctt
caactccaggttcaaccatcaagcgagagcatcgacgcagctatcggtgatgttttatcg
aaaccgtggttgcctttgcctcttggactgaagccaccttcagtggacagtgtgatgggc
gagctgcagaggcaaggcgtagcaaacgttcctccagcgtgtggatga
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