KEGG   Oryza sativa japonica (Japanese rice): 4341099
Entry
4341099           CDS       T01015                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4341099
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4341099
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 4341099
NCBI-ProteinID: XP_066167475
LinkDB
Position
6:join(18160626..18160755,18163134..18163234,18163654..18163722,18163833..18165080,18165219..18165296,18166903..18167085,18167162..18167272,18167357..18167509)
AA seq 690 aa
MAAAAAPESYIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGTEGRKKDGQQIP
ASDKIYEYILFRGSDIKDLQVKSSPPAQPTTLHNDPAIIQSHYPCPASTSLPPPASTAAD
PASHNGQSGIQMPPPLPQFQPGASLPSWNSSPMPSSANGAPASTTTADPGSHNGQSGIQM
PPPLPQYQPGASLPSWNSSPMPSSANGAGLTMPPMYWPGFYTPPSGFPHLQQPPFLRPPH
GLTIPQALQQPIQYPGLNAPLPPFPRMPEFALPQPGSGNNLTQNLGVSTSMPVPALSSTP
ATESSANQLPNMLSSVSASVFSLGLTPPSVNPPVSTIESTMSQSQGISPLMNNKPVSLPL
DSTVPSASSNKPMNIPVPTYLPSSQPPLANIAASAATVAEPVTLVTPGQLLPTISSTVLS
ADALETASAMIPSPKAASSMVSSSQAALAASSQVTSSVVSPSEDQFASSPVPSHQQLEQN
NEDRHTKKPEWKAKQHSVAPSNKEPLLPAPKPTLQKPVGASSYIQYNNRGRGRGRGRGRG
IGQSRPITKFTEDFDFMAMNEKFNKDEVWGHLGKSKGQLNDDPNEYEDDVLEDDISPGKP
EVKPVYVKDDFFDSLSCNTIDNGGGNGRIKFSEQRKIDTETFGDSARHRPMGMRGGGRGP
RGGPRGRGYYGRGYGYMGRGRGYSYPNHQS
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggcgccggagtcgtacatcgggagcgtgataagcctcacgtcgaag
agcgagatccggtacgagggcgtcctctacaccatcaacaccgaggagtccagcatcggg
ctcaggaacgttcgctcatttggaactgaaggtcgtaagaaggatggtcaacagattcca
gccagtgacaagatatatgaatacatactatttagaggaagtgatataaaggatttacaa
gtcaaatcctctccaccagctcagcctactactttacacaacgatccagcgattatccag
tcacattatccttgtcctgcctctacgagcttaccgcctcctgcaagcacagcagctgat
cctgcctcacacaatggtcagtcaggaattcagatgcctccaccattgccccaatttcaa
cctggggccagtttaccatcatggaactcatcacctatgccatcatctgcaaatggcgct
cctgctagcacaacaacagctgatcctggctcacacaatggtcagtcaggaattcagatg
ccaccaccgttgccccaatatcaacctggggccagtttaccgtcatggaactcatcacct
atgccatcatctgcaaatggtgctggccttactatgccaccaatgtactggccaggattt
tatacaccaccaagtgggtttcctcatttgcaacaaccgccctttcttcgtccaccacat
ggcttgacaattccacaggccttgcagcagcccatacagtatcctggacttaatgcacct
ttaccaccttttcctagaatgccagagtttgctttaccacaacctggtagtggtaataac
ttgacccagaatctaggtgtatccacatcaatgccggtccctgccttatcaagtactcca
gcaactgaatcatctgcaaaccagcttccaaatatgctgtcatctgtttctgctagtgta
ttctctctgggtttaactcccccatctgttaatccgccagtctctacaattgaatcgact
atgtcccaatcgcaaggcatctctcctctgatgaacaataagccagtctcacttcctctt
gactctactgtaccatctgccagcagtaataagcctatgaatatacctgtgccaacctat
ctaccttcctctcagccaccattggctaatattgcagcaagtgcagccactgttgcagaa
ccagttacattggtcactcctggccaacttctaccaaccatttcatctacagtcctttcg
gctgatgccttggaaacagcttcagctatgattccatcccctaaggctgcctcctctatg
gtctcatcctctcaggctgccttggctgcatcctctcaggttacttcctctgtagtttca
ccctcagaggatcaatttgcttcctcacctgttccatcacatcaacagctggagcaaaac
aatgaagataggcacaccaagaaacctgaatggaaggctaaacaacactctgttgctcca
tccaacaaggaacccctgttgccagcacctaagcctactcttcagaagcctgttggagct
tcctcatacattcaatacaacaatagaggccgaggaagaggaagaggccgaggaagagga
attgggcaatcacgtcctataaccaagtttacagaggacttcgatttcatggcaatgaat
gagaagtttaacaaagatgaagtatggggccatctcggtaaaagcaaaggacagttgaac
gatgatcctaatgagtatgaagatgatgttctagaagatgatatttctcctgggaagcca
gaagttaagcctgtatatgtcaaagatgacttctttgattcactgtcatgcaataccatt
gataatggaggggggaatggaagaatcaaattctcggagcagagaaaaatagacacagag
acttttggtgattctgcaaggcatcggcccatgggcatgcgtggaggagggaggggtccc
cgtggtggaccccgtggacgtggttactatgggagggggtatggatatatgggaaggggg
cgcggctactcctacccaaaccaccaatcttag

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