KEGG   Oryza sativa japonica (Japanese rice): 4341140
Entry
4341140           CDS       T01015                                 
Symbol
MetRS
Name
(RefSeq) probable methionine--tRNA ligase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00450  Selenocompound metabolism
osa00970  Aminoacyl-tRNA biosynthesis
osa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    4341140 (MetRS)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4341140 (MetRS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4341140 (MetRS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4341140 (MetRS)
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     4341140 (MetRS)
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   4341140 (MetRS)
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    4341140 (MetRS)
 Prokaryotic type
   Other AARSs
    4341140 (MetRS)
SSDB
Motif
Pfam: tRNA-synt_1g tRNA_bind Anticodon_3 tRNA-synt_1 Anticodon_1 tRNA-synt_1e CoV_peptidase
Other DBs
NCBI-GeneID: 4341140
NCBI-ProteinID: NP_001410923
LinkDB
Position
6:complement(join(18995462..18995692,18995786..18995887,18995982..18996211,18998972..18999098,18999194..18999337,18999414..18999542,18999629..18999694,18999845..18999963,19000146..19000260,19000335..19000441,19001519..19001609,19002237..19002380,19002459..19002689,19002802..19002957,19003039..19003192,19003682..19003826,19003950..19004064))
AA seq 801 aa
MASPPPPPKLPVPGRRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYI
CGTDEYGTATETKAMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQA
IFQKLMENNWLTENTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLN
PTELIDPKCKVCKNTPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWL
KEGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKDPDNV
ELFQFMGKDNVPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGND
AKDTNIPPEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAG
AGYDSIVPDAPNAESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYL
QESQFWKLYKEDPAACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFC
DDKGEIAKAKRPWDFVSAGHKIGKPSPLFKELKDEEVESFRNKFAGSQAERSSKAQADAE
AKKVADKLKGTKLSDGGQKKEQKKQSGGSKSKNAEVDVTVAKLDIRVGLIRKAQKHPDAD
SLYVEEIDVGEEAPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASN
EDHTKVELVEPPESAAVGERVTFAGYSGEPEASLNAKSKTWEKLSADLHSNGELVACYKD
VPFTTSAGVCKVKSIASGEIR
NT seq 2406 nt   +upstreamnt  +downstreamnt
atggcgtcgccgccgccgcctccgaagctgccggtccccggccgccgcaacatcctcgtc
accagcgcgctgccctacgtcaacaacgtccctcacctcgggaacatcatcggctgcgtg
ctcagcgccgacgtgttcgcgcgctactgccggctgcggggctacaacgtcatctacata
tgcggcaccgacgagtacgggacggccaccgagaccaaggccatggaggagaagtgctcg
cccaaggagatctgcgacaagtatcatgctgtccatagtgaggtttacaaatggtttgac
ataaagtttgacaagtttggacggacatcctctccccaacagactgaagtctgccaagca
attttccaaaagttgatggaaaacaattggctcacagaaaacaccatgcagcagctgtac
tgtgatacttgccaacgatttttagcggataggctcgtggaggggaaatgtccaactgaa
ggctgtaattatgaggcggcgcgaggtgatcagtgtgaaaactgcagcaaattgttgaat
ccaactgagctaattgatcccaagtgtaaggtctgtaagaatactccacgtgtccgtgac
acagatcacttattccttgagcttcctcttttgagcgacaagttggtaaactatatcaat
gaaacttctgtagctggtatgtggagtcaaaatgctattcaggcaacaaacgcatggctg
aaggaaggtttgaagccacgctgtatcacccgagatctcaagtggggtgttcctgttcca
catgagaaatataaggacaaggtgttctatgtttggtttgatgcaccgattggctatgta
tctatcacagcttcctatacacctgattgggagaaatggtggaaggatcctgataacgta
gaattgtttcagttcatgggtaaagataatgtgccatttcacacggtcatgttcccttct
acattacttggaactggcgaaaagtggacaatgatgaagaccataagtgtgactgaatat
ttgaactacgaagcaggaaaattctccaagagccatggtattggagtctttggtaatgac
gcgaaggatacaaatatacctcctgaagtgtggcgttactacttgcttacaaatcgtcct
gaggtatcagatacactatttacttgggctgatttgcaagccaaattaaacagtgagttg
ttgaacaacttggggaatttcatcaaccgtgtgctcagttttgttgcaaaaccagcagga
gccggatatgattccatcgtacctgatgctcctaacgctgagtcgcatccactgacaaag
gcacttgttgagaaaactaataaatgggttgaacaatatcttgaagcaatggaaaaggtt
aaattgaaacaaggactgaagagcgctatgggcatttctagtgatggaaatgcatatctg
caagagagccagttttggaaactttataaggaagatccagcagcctgtgctgttgtaatg
aaaacttcagttggtgtggtctatctccttgcctgtttgctggagcctttcatgccttca
ttttccaatgaagtgttgctgcaattaaatatgacccctgaagaaagcttgtctttctgt
gacgataaaggagaaatcgccaaggcaaaaagaccttgggattttgtatcagcaggccac
aaaataggaaagccttcacctctatttaaagaactgaaagatgaagaagtagagtccttc
aggaataaatttgcaggcagccaagctgagaggagctcaaaagcacaagctgatgctgaa
gctaagaaggttgctgacaagctcaagggcacaaaattatctgatggaggtcaaaagaag
gaacagaaaaaacaatcaggtggttcaaaatcaaagaatgcagaggtggatgtcacggtg
gcaaagttggatattcgagtggggcttatcaggaaagcacagaagcatccagatgctgat
tcgctgtatgtagaggagattgatgttggagaggaagcaccaagaacagttgttagcggc
cttgtcaaattcatccctcttgaagaaatgcagaaccggaaagtgtgtgttctctgcaat
ctgaaaccagtggcgatgcgcggtataaaatcacatgcaatggttctggctgcatcaaat
gaggaccatacaaaggttgagctggttgagccaccagaatccgcagcggttggggagagg
gtgacctttgctgggtactctggagagcctgaggcgtctctcaacgcaaagagcaagacg
tgggagaagctatcagctgacctgcacagcaacggcgagctcgtggcgtgctacaaggat
gtacccttcacaacttcagctggagtttgcaaggtgaagtcgatagcgagtggagaaatt
cgctag

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