Oryza sativa japonica (Japanese rice): 4341189
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Entry
4341189 CDS
T01015
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
4341189
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
osa04040
]
4341189
Ion channels [BR:
osa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
4341189
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
4341189
NCBI-ProteinID:
XP_015643088
UniProt:
Q5Z7C1
Q652Z5
LinkDB
All DBs
Position
6:join(20401487..20401518,20402403..20402919,20403356..20403568,20404856..20405130,20405226..20405337,20405912..20406148,20407312..20408010)
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AA seq
694 aa
AA seq
DB search
MMMGREDKYVRFEDWRSEQSVMSPRRHNALSSLKERTAGVFAFLGNLVHSETLKRLVLHE
RKLTTRTLHPQGPFLQSWNKIFVLSCIFAVSVDPLFFYIPVINDNNTCWYLDKKLEITAS
VLRFFTDIFYILHIIFQFRTGYIASSLTTFGRGVLVEDRYAIAKRYLSTYFLIDVFAVLP
LPQVVILVVLPNLGGSEVTKAKNILMFIVICQYVPRLIRIRPLYLQITRSAGVITETPWA
GAVLNLLIYLLASHVLGALWYLLSIERKDACWRDMCSNNSTVCNQAYLYCGDKENSILRT
ACLPIDSNDIDPNFGIYVPALNNVSQSTNFLAKLFYCVWWGLQNLSSLGQNLKTSTYAWE
NLFAVFVSISGLVLFALLIGNVQTYLQSAHLREEEMRVKSRDTDQWMSYRLLPENLKERI
RRHEKYRWHQTSGVDEELLLMNLPKDLRRAIKRHLCLSLLMRVPMFENMDDQLLNALCDR
LKPVLYTEGSCIIREEDPVNEMLFIMRGNLMSMTTNGGRTGFFNSDVLKGGDFCGEELLT
WALDPTSVSSLPSSTRTVKTMSEVEAFALRAEDLKFVATQFRRLHSKQLQHTFKFYSQHW
RTWAACFIQAAWHRYCRKKIEDSLREKEKRLQFAIVNDGATTLSFRAAIYASRFAGNMMR
ILRRNATRKARLKESVPARLLQKPAEPNFAAEEQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggaagagaggacaaatatgtgagatttgaggactggagatctgagcagtca
gttatgtcaccacggaggcataatgctttaagttcacttaaagaaagaactgctggagtt
tttgcattcctaggaaaccttgtgcattctgaaaccttaaagagattggtgctgcatgaa
aggaagttgacaactagaactcttcatcctcagggaccatttctgcaaagctggaacaag
atatttgttttgtcatgtatctttgcagtttctgtggacccattgttcttctatattccg
gttatcaatgacaacaacacatgctggtatttggataaaaagttggaaatcacagcaagt
gtcctgcgctttttcacagatatcttctatatactccatatcatatttcagttcaggaca
ggttatattgcgtcttctcttacaacttttggtcggggtgtcttggttgaggatagatat
gcaatagcaaagcgatacttgtcaacatattttctgatcgatgtctttgctgttctaccc
ctccctcaggtggttattttggttgtgctacctaatcttggaggctcagaggttacaaaa
gccaaaaatatcttgatgtttatagttatatgccaatatgtgcctcggctgatccgaata
aggccactgtatctccaaatcacaaggtctgctggggtaattacagagacaccatgggct
ggtgctgttttgaaccttttaatttacttgctcgccagtcatgtccttggagcactctgg
tacttgctttccattgaacgcaaagatgcctgctggagagacatgtgtagtaataatagt
acagtctgtaatcaggcatatttgtactgtggggataaggaaaactcgatcttacggact
gcttgccttccaatcgactcaaacgatatagatccgaactttggaatttatgtgccagct
ctaaataatgtctcgcaatcaactaattttttggcaaaactattctattgtgtttggtgg
ggtctgcaaaatcttagctctctgggccaaaaccttaagacaagcacttatgcatgggag
aatctgtttgcagtttttgtctcaatatcaggcttggttctgtttgcactgctaattggt
aatgtgcagacctatttgcagtcagcccatctgagagaagaagaaatgagagtgaaaagc
cgtgatacagatcaatggatgtcatatcgactgcttcctgagaatctcaaggaacgaata
cgtcgtcatgaaaaatatagatggcaccagacgagcggggttgatgaagaactcttgctt
atgaacctccccaaggatcttaggagggctataaaacggcatctttgcttatcacttctt
atgagggttccaatgtttgaaaacatggatgatcaactcttgaatgccttgtgcgaccgc
ctaaagcctgttctttatacagaaggtagctgcataattcgtgaagaggatccagtaaat
gaaatgctgttcatcatgagaggtaatctcatgagtatgacaacgaatggtggaagaact
ggcttcttcaactctgatgttttgaaaggtggagatttctgtggcgaagagctcctgacc
tgggctcttgaccccacgtcagtttccagcctccctagctcaaccaggacagtgaagacg
atgtccgaagtcgaagcttttgccctgagggctgaagacttgaagtttgtggccacccag
ttccgacggctacacagcaaacagctccagcacacgtttaagttctactcgcagcattgg
agaacctgggcagcctgtttcatacaagcagcctggcataggtactgcagaaagaagatc
gaagactctctacgcgagaaggagaagaggttgcagttcgcaatcgttaatgacggtgct
acaactctcagcttcagggcagcgatatatgcttcgcgtttcgctggcaacatgatgcgg
atcttgaggagaaatgccacccgcaaggctcggttgaaggaaagtgtgcctgcaaggttg
ttacaaaaaccagcagaacccaactttgctgcagaagagcagtag
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