Oryza sativa japonica (Japanese rice): 4341242
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Entry
4341242 CDS
T01015
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00040
Pentose and glucuronate interconversions
osa01100
Metabolic pathways
Module
osa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
4341242
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
4341242
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
4341242
NCBI-ProteinID:
XP_015642129
UniProt:
Q5Z9T3
Q5Z5X0
A0A1L2JRB2
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Position
6:complement(join(21449734..21450480,21450585..21451076))
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AA seq
412 aa
AA seq
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MGFVRALFLLAMVCVAAHAKDYPKEEGAKAEGPAAASGGGGGSTHDVVKLGGKGDGKTDS
TKAVNEAWTAACAGTGKQTIVVPKGDFLTGPLNFTGPCKGDIVIQLDGNLLGSTDLALFK
SNWIEIMRLESLEISGKGKLDGQGAAVWSKNSCAKKYDCKILPNTLVLDFVNNGLISGIS
LVNPKFFHMNVFKSKNITIKDVTITAPGDSPNTDGIHMGDSSKISIIDTVIGTGDDCISI
GPGTEGVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAA
SVLTASKFTYENIKMEDVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNITGTSSTPE
AVSLLCSDKLPCTGVTLNDIKVEYSGTNNKTMAVCKNAKGTATGCLKELSCF
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgtccgtgccctgttcctgctggcgatggtgtgcgtggcggcgcacgcgaag
gactaccccaaggaggagggcgcgaaggcggaggggccggccgccgcctcggggggcggc
ggcggtagcacccacgacgtggtgaagctgggcggcaagggcgacggcaagacggacagc
accaaggcggtcaacgaggcgtggacggcggcgtgcgctggcaccggcaagcagacgatc
gtcgtccccaagggcgacttcttgacgggtcccctcaacttcaccgggccatgcaagggc
gacatcgtcatccagctcgacggaaacctgctcggctccaccgacctcgccttattcaag
tcgaactggatcgagatcatgcgcctcgaaagcctcgaaatcagcggcaagggcaagctc
gacggccagggcgccgccgtctggagcaagaactcctgcgccaagaaatacgactgcaag
atcctccccaacactttggtgctggacttcgtgaacaacggtctcatcagcggcatctct
ctggtgaaccccaagttcttccacatgaacgtgttcaagagtaagaacatcaccatcaag
gacgtgaccatcaccgcgccgggggacagcccgaacacggacggcatccacatgggcgac
tcctccaagatcagcatcattgacacggtcatcggcaccggcgatgattgcatctccatc
ggccccggcaccgagggcgtcaacatctccggcgtcacctgcggtcctggccacggcatc
agcgtcggtagcctgggcaggtacaaggacgagaaggatgtgacggatgttaccgtcaag
aactgcgtgctcaagaagtccaccaatggcgtccggatcaagtcctatgaggacgccgcc
tcggtgctcaccgcctccaagtttacctacgagaacatcaagatggaggacgttgctaac
cccatcatcatcgacatgaagtactgccccaacaagatctgcactgccaacggcaactcc
aaggtcaccatcaaggacatcaccttcaagaacatcaccggcacctcctccacgcccgag
gccgttagcctcctctgctccgacaagctgccgtgcaccggcgtcaccttgaatgacatc
aaggtcgagtactctggcacaaacaacaagaccatggccgtctgcaagaatgccaagggc
actgccaccggctgcctcaaggagctttcgtgcttctaa
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