KEGG   Oryza sativa japonica (Japanese rice): 4341330
Entry
4341330           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4341330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4341330
   03041 Spliceosome [BR:osa03041]
    4341330
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     4341330
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4341330
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    4341330
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_Nup35 Calcipressin Med8 eIF-3c_N
Other DBs
NCBI-GeneID: 4341330
NCBI-ProteinID: XP_015644287
LinkDB
Position
6:join(22677165..22677436,22677533..22677573,22678806..22678969,22679061..22679163,22679290..22679459,22680250..22680723)
AA seq 407 aa
MAGYGEENQNGMNGYEEEEEEEEVEEVEEEVEEEEEEEEEEEGADATAAAADAAEEVAEE
RRGGGGEVEGVGNGEEAGRTAGGGEGGDSSGKIFVGGVAWETTEESFTKHFEKYGAISDS
VIMKDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTIDGRTVEVKRTVPREEMSSKDGPKTR
KIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSE
GRMHDLAGKQVEIKKAEPKKPGGGDSSSNGRHSHGSGGGHRSSYRGSGGGNSGSSSSGGY
GGYGGGYRSAAAAYYGSTGYAGYGRGYGYGGNPAFGSGFGSGYGGSMYGGPYGAYGAYGG
AYGGGGAYGAPGGYGAGGYGAYGGAGGMGGGGSTSGRGSSRYHPYGK
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcggggtacggggaggagaaccagaacggcatgaacgggtacgaggaggaggaggag
gaagaggaggtggaggaggtcgaggaagaggtggaggaggaggaggaggaagaggaggag
gaggagggggctgatgccaccgccgcggctgccgatgcggcggaggaggttgcagaggag
aggcgaggcggaggtggagaagtggagggcgtcggcaatggcgaggaagcggggaggact
gcgggtggtggagagggcggtgattcgtcggggaaaatttttgttggaggtgtagcctgg
gagacaactgaagaatcgttcaccaagcattttgagaaatatggagctatatctgattct
gtgatcatgaaagacaagcatacaaagatgcctcgtggatttggttttgttacattttcg
gatccatctgttattgacaaggttctgcaagatgaacacactatagatggaagaacagtt
gaagttaaaaggactgtcccgagggaggaaatgtcgtcgaaagatggtcctaaaacgaga
aaaatctttgttggtggtattccaccatctcttactgaagataaattgaaggagcatttc
tcttcatatgggaaggtagttgagcatcagataatgcttgaccatggcactgggcggtca
cgaggctttggctttgtcacatttgaaaatgaggacgctgttgaaagggttatgtcagaa
gggagaatgcatgatcttgcagggaaacaggttgaaataaagaaggctgagcctaagaaa
cctggcgggggtgattctagctctaatgggagacatagtcacgggagtggtggtggccac
cgtagttcttaccgtggtagtggtggtggcaattctggaagcagcagcagcggtggctat
ggtggatatggtggtggctatcggtcagctgctgcagcttattacggtagcacaggttat
gctggctatggcagaggttatggatatggaggtaaccccgcatttgggtcaggctttggc
tctggctatggtggttcaatgtatggaggtccatatggtgcctatggtgcatatggtggt
gcctatggaggtggtggtgcatatggtgcaccgggtggctacggtgcaggaggatatggt
gcttatggcggagctggaggtatgggcggtggtgggagcacaagtggtagaggctcgagc
agataccacccgtacggaaaatga

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