Oryza sativa japonica (Japanese rice): 4341413
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Entry
4341413 CDS
T01015
Name
(RefSeq) syntaxin-125
KO
K08486
syntaxin 1B/2/3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4341413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4341413
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4341413
Membrane trafficking [BR:
osa04131
]
SNARE
Syntaxin (Qa)
Stx-PM
4341413
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
4341413
Exosomal proteins of other body fluids (saliva and urine)
4341413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
ATG17_like
PigL_N
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
4341413
NCBI-ProteinID:
XP_015641157
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Position
6:join(24036529..24037179,24037274..24037759)
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AA seq
378 aa
AA seq
DB search
MHGALPQIGRERPYTSCRITSFMDGLHISFLGSSPIAILSSSPSNRSYVSSAHPLASSLL
LLLIHKRSSEMNDLFSSSSFKKYADASPASGVGGSDMEAGGEGVVNLDRFFEDVEGVKED
MKGLEALYKRLQSTNEETKTAHDARAVKALRSRMDGDVEQVLRRAKAVKGKLEALDRDNA
TSRKVPGCGPGSSTDRTRTSVVAGLGKKLKDIMDDFQGLRTRMAAEYKETVARRYYTVTG
EKAEDSTIDSLIESGESESFLQKAIQEQGRGQVMDTISEIQERHDAVKDIERSLLDLHQV
FLDMAALVEAQGHQLNDIESHVAHASSFVRRGTVELEVAREHQKSSRKWACVAVLAGIIL
IAVLILPVLINLRILTLR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcatggcgcgttgccacaaataggcagggagaggccctacacttcatgtcgaattact
agtttcatggacggactccatatatcctttcttggtagctcacccattgccattctttca
agctccccgtccaaccgatcgtacgtctcctcagctcatccgcttgcctcgtcgctgctg
ctgctgctgatccacaagcgttcgtcggagatgaacgacctgttctcgtcgagctcgttc
aagaagtatgcggacgcgagcccggcgagcggcgtcggcggcagcgacatggaggccggc
ggcgagggcgtggtgaacctggacaggttcttcgaggacgtggagggggtgaaggaggac
atgaaggggctggaggcgctgtacaagcggctgcagtcgacgaacgaggagacgaagacg
gcgcacgacgcccgcgccgtgaaggccctccgctcccgcatggacggcgacgtcgagcag
gtgctccgccgcgccaaggccgtcaagggcaagctcgaggccctcgacagagacaacgcc
acctcccgcaaggtccccggctgcggccccggctcctccaccgaccgcacccgcacctcc
gtcgtcgccggcctcggcaagaagctcaaggacatcatggacgacttccaggggctgagg
acgaggatggcggcggagtacaaggagacggtggcgaggaggtactacacggtgacgggg
gagaaggcggaggacagcacgatcgattcgctcatcgagtcgggggagagcgagtcgttc
ctgcagaaggcgatccaggagcaagggcgggggcaggtgatggacaccatctcggagatc
caggagcggcacgacgccgtcaaggacatcgagcgcagcctgctcgacctgcaccaggtg
ttcctcgacatggcggcgctcgtcgaggcccagggacaccagctcaacgacatcgagagc
cacgtcgcgcacgccagctccttcgtccgcaggggcaccgtcgagctcgaggtggcgcgg
gagcaccagaagagcagccgcaagtgggcgtgtgtcgccgtcctcgccggcatcatcctc
atcgccgtcctcatcctcccggtgctcatcaacctccgcatcttgacgctcagatga
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