Oryza sativa japonica (Japanese rice): 4341476
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Entry
4341476 CDS
T01015
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04016
MAPK signaling pathway - plant
osa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
4341476
04075 Plant hormone signal transduction
4341476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4341476
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
4341476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_FBXL15
LRR_SKP2
LRR_4
LRR_6
LRR_At5g56370
LRR_RPS2
F-box-like
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
4341476
NCBI-ProteinID:
XP_015643083
UniProt:
A3BDE3
LinkDB
All DBs
Position
6:join(24895890..24895914,24895996..24897965)
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AA seq
664 aa
AA seq
DB search
MPPFHDYRDGGVLVMEPAASAALFGGVRSRKRARVTAVPPCGFVSAAAEAVEVVEEEGLT
AAKRQKQQQQQREAPSLDALPDECLFEILRRVKGARARCASAAVSRRWLALLGGIRSSEI
KREPAAAAVPDLNQVFVDEDEEEEDEFEVPLGGGCSSERCLEGREATDVGLMAVAVADAL
RGSLESLVIRGSHPTRGVTDAGISAAARGCPSLLSLALWHVPQVTDAGLAEIAAGCPSLA
RLDITGCPLITDKGLAAIAQGCPDLKVVTVEACPGVADEGLKAIGRCCAKLQSVNIKNCA
HVGDQGVSGLVCSAAASLAKVRLQGLSITDASLSVIGYYGKAITDLTLARLPAVGERGFW
VMANALGLQKLRFMSVSSCPGVTDLALASIAKFCPSLKQLNLKKCGQVSDGRLKDFAESA
KVLESLQIEECNKVTLMGILAFLLNCSPKFKALSLVKCNGIKDICSAPAQLPLCKSLRSL
TIKDCPGFTDASLAVVGMICPQLENVDLSGLGAVTDNGLLPLIKSSESGLVHVDLNGCEN
LTDATVSALVKAHGSSLARLSLEGCSRITDASLFAISEGCTDLAELDLSNCMVSDYGVAV
LASARQLKLRVLSLSGCLKVTQKSVPFLGSMSASLEGLNLQFNFIGNHNIASLEKQLWWC
DILA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgttccacgattacagagatggtggtgttcttgtgatggagccggcggcgtcg
gcggctctgttcggcggcgtcaggtcgcggaagcgggcgcgggtcaccgccgtgccgccc
tgcggcttcgtctccgccgccgcggaggcggtggaggtggtggaggaggaggggttgacg
gcggccaagaggcagaagcagcagcagcagcagcgggaggcgccgtcgctcgacgctctc
cccgacgagtgcctcttcgagatcctccgccgcgtgaagggcgcccgcgcccggtgcgcc
tccgcggccgtctcccgccgctggctcgctctcctcggcggcatccgctcgtcggagatc
aagcgagagccggcggcggcggcggtgccggacctcaaccaggtgttcgtcgacgaggac
gaggaggaggaggacgagttcgaggtcccccttggcggcggctgctcctccgagaggtgc
ctcgaggggcgcgaggccacggacgtcggcctcatggcggtggccgtcgccgacgcgctc
cggggaagcctcgagagcctcgtcatccgtgggagccacccgacgcgcggcgtcaccgac
gccggcatctcggccgccgcgcgcggctgcccgtcgctcctctcgctcgccctgtggcat
gtccctcaggtaaccgatgccggcctcgccgagatcgccgccggctgcccctcgctggcg
aggcttgacatcaccggctgcccgctgatcaccgacaagggcctcgctgcaattgctcag
ggttgcccggacttgaaggtggtgaccgtcgaggcatgccccggtgttgctgacgagggc
ctcaaggcgattggccggtgctgcgcgaagctgcagtcggtgaacatcaagaattgcgcg
catgtcggtgaccagggtgtctccggccttgtctgctccgcggccgcatcgcttgccaag
gttcgcctccagggattgagcatcaccgatgcttctctttcggtgattgggtactacggg
aaggcgatcaccgatctcaccctcgctcgccttcccgcggttggcgagaggggtttttgg
gtgatggccaacgcccttggcctgcagaagctcaggttcatgagtgtcagctcctgcccg
ggagtcactgatcttgcgctcgcatcgattgccaagttctgcccgagcttgaagcagctc
aacctcaagaaatgcggtcaggtctcggatggccgtctcaaggatttcgcggaatcggca
aaggtcttggagagtttgcagattgaggaatgcaacaaggttactctcatgggcattctg
gccttcctcctcaactgcagcccgaagtttaaggccctctcactggtcaagtgcaacggg
atcaaggacatctgctctgctcccgcgcagcttcccctgtgcaagtctctccgatccctc
accatcaaggattgcccaggtttcaccgatgccagcttggccgtggtcggcatgatctgc
cctcagttggagaatgtcgacttgagtggtctcggtgcagttacagacaacgggctcctt
ccattgatcaagagttccgaaagtgggctggtccatgtcgacttgaacggctgcgagaat
ctcacagatgctactgtttctgccttggtgaaggcacatggtagttcgcttgcacgcctc
agtctcgaaggttgcagcaggatcactgatgcaagcctgtttgccatttctgagggctgt
accgatctcgccgaacttgatctctcaaactgcatggtcagcgactacggtgttgcagtg
ttggcgtcagcgaggcagctcaaacttcgtgtcctctcactttctggttgtttgaaggtt
acccagaagagtgttcctttcttaggcagcatgtcggcatcgttggagggcctcaatctc
cagttcaacttcattggcaaccacaacattgcatcgctggagaagcagctctggtggtgc
gacatccttgcttag
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integrated database retrieval system
