Oryza sativa japonica (Japanese rice): 4341494
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Entry
4341494 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2
KO
K12194
charged multivesicular body protein 4A/B
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03250
Viral life cycle - HIV-1
osa03272
Virion - Hepatitis viruses
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
4341494
03272 Virion - Hepatitis viruses
4341494
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4341494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4341494
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4341494
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
4341494
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4341494
Exosomal proteins of other body fluids (saliva and urine)
4341494
Exosomal proteins of colorectal cancer cells
4341494
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
TraF_2
SRP_TPR_like
Flu_C_NS2
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
4341494
NCBI-ProteinID:
XP_015644535
UniProt:
Q69V59
A3BDG1
LinkDB
All DBs
Position
6:join(25080577..25080663,25082372..25082471,25083297..25083382,25083479..25083570,25084271..25084385,25084459..25084641)
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AA seq
220 aa
AA seq
DB search
MSGVFGKVFGKSKAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKN
KRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHK
ATNIDDVDKTMDEINDNMENMRQIQDLLSAPIGAAADFDEDELEAELADLEGEELEAELL
APTTTAPTAPVRVQQPTRPSAQSSKTEDDELAALQAEMAM
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggtgttcggcaaggtgttcgggaagtccaaggcgcagagccaggccaccgcg
ctggcctccatcgacaagctcagcgagactcttgaaatgctggaaaagaaagaaaatttg
ctagtgaagaaagcgaatcttgaggttgagaaggccaagaccttcactaaagcgaagaat
aaaagagctgcaatacaatgcttaaagaggaagagattatatgagcaacagattgagcag
cttggtaatttccaattaaggatacatgatcagatgataatgctggaaggtgcaaaggct
acaacagagactgttgatgcattgagaactggagcatcggcgatgaaagcaatgcacaaa
gcgacaaatattgacgacgttgacaagacaatggatgaaattaatgacaatatggagaat
atgaggcagatccaggatctactatctgctcctattggagctgcagctgattttgatgaa
gatgagctggaagctgaattagcagatctggagggggaggaattggaggcagagcttcta
gcacctacaacgactgcccctactgctccagtgcgtgtacagcaaccaactcggccttct
gcccagagcagcaaaactgaagatgacgagttggcagctttgcaggcagagatggctatg
taa
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