Oryza sativa japonica (Japanese rice): 4341514
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Entry
4341514 CDS
T01015
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00040
Pentose and glucuronate interconversions
osa01100
Metabolic pathways
Module
osa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
4341514
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
4341514
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Paralog
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
4341514
NCBI-ProteinID:
XP_015642829
UniProt:
A0A0P0WYX7
Q69X45
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All DBs
Position
6:join(25241881..25242024,25242135..25242470,25242907..25243449,25243791..25244027)
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AA seq
419 aa
AA seq
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MTPLLQITMSSLIITSWWWLQATCTARQLVFDVRDFGAVADGQTDNSKAFERAWAKACAA
PGRAAVVVPAAGGGGGGGGGYLLHPVVFRGPCKGFVEVRVAGVVRAPAGLDAFRGYHEWI
NFAGIDGLLVTGGGTFDGRGASSWHLNDCPWKPDCVPPPSSIKLGSVRNATITGVTSLDS
KFFHVTIVGSHDVEVSHVSIRAPRDSPNTDGVHIQGSTGVRITDTAVATGDDCVSVGPGS
ADVTVSGVSCGPGHGISVGSLGRSPGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSA
AAAAAAAVSGLVFEDIVMRRVRNPIIIDQEYCPYLSCHHQSERRPSVVRISDVKFRNIRG
VSATQVAVKLSCSAASPCRGVELRDIDLRYVRRGVATVSRCANVAGGVAGGTLVPPPCI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacacctctgttacaaattaccatgtcttctctgatcatcactagctggtggtggcta
caggctacttgtactgctcgccaattagtcttcgatgtcagagacttcggcgctgtcgcc
gacggacagacagataattccaaggcgtttgagagggcgtgggcgaaggcgtgcgcggcg
ccggggagggcggcggtcgtcgtgcccgccgccggcggcggcggcggtggcggcggtggc
tacctgctccacccggtggtgttccggggaccctgcaaggggttcgtcgaggtgcgggtc
gccggcgtcgtccgcgcgccggccggcctcgacgcgttccgggggtatcacgagtggatc
aacttcgccggcatcgacggcctgctcgtcaccggcggcggcacgttcgacggccgcggc
gcgtcgtcgtggcacctcaatgactgtccctggaaaccggactgcgtgcctcctccctca
tccatcaagctggggagcgtgaggaacgcgaccatcacgggtgtgacgtcactggacagc
aagttcttccacgtcaccatcgtcgggagccacgacgtggaggtgagccacgtcagcatc
cgggccccgcgcgacagccccaacacggacggcgtccacatccagggctccacgggcgtc
cggatcaccgacacggcggtcgccaccggcgacgactgcgtctccgtcggccccggcagc
gccgacgtgacggtgtccggcgtgtcgtgcggccccgggcacggcatcagcgtggggagc
ctcggccggagccccggcgaggccgacgtgcggcggctgcgcgtgtccaactgcaccatc
gccggcacggccaacggcgtgcggatcaagacgtggcgcggcggccagcggagctccgcc
gccgccgcggccgccgccgccgtttccggcctcgtcttcgaggacatcgtcatgaggaga
gtccgcaaccccatcatcatcgaccaggagtactgcccctatctctcctgccaccatcaa
tcggagcggcggccgtcggtggtgaggatcagcgacgtgaagttcaggaacatcaggggg
gtgtcggcgacgcaggtggcggtgaagctgtcgtgcagcgcggcgagcccgtgccgaggg
gtggagctcagggacatcgacctcagatacgtcaggcgaggggtggccaccgtgtcgcgg
tgcgccaacgtcgccggaggcgtcgccggcgggacgcttgtgccgcccccttgcatatga
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