Oryza sativa japonica (Japanese rice): 4341515
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Entry
4341515 CDS
T01015
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00040
Pentose and glucuronate interconversions
osa01100
Metabolic pathways
Module
osa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
4341515
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
4341515
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Paralog
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
4341515
NCBI-ProteinID:
XP_015643658
UniProt:
A0A0N7KME5
Q69X44
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All DBs
Position
6:join(25246098..25246628,25247167..25247913)
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AA seq
425 aa
AA seq
DB search
MAFRNHDAAMVLFFFLLMVTTYANAHGHSKKPEEITQGVYGAAAAVAAGPGGTFDITKLG
AVGNGRADSTGAVMAAWRSACAGAGKQTILIPKGDFMTGAMELRGPCNGAVTIQLDGNLL
GSNDLSKYPGKKMPNWVEVRHVDNFVISGKGKLDGQGPGVWSKNSCAKNYNCKLLPNTLV
LNTVNDGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMGDSSKITIA
ATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSVTRCVLRKT
TNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGDSKVSVRDV
TFRNITGSSNTPAVVQLLCSGKLPCSGVAMQDVRVLYGGSDKKTTAVCDHALGKSTGCLK
ELACL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagaaaccatgacgctgccatggtcctcttcttcttcctcctcatggtgact
acctacgccaacgcgcacggacacagcaagaagcccgaggagatcactcagggcgtttac
ggggcggcggcggcggtggcggccggccccggcggcacgttcgacatcaccaagctcggc
gccgtcggcaacggcagggcggacagcaccggcgcggtgatggcggcgtggaggtcggcg
tgcgccggcgccgggaagcagacgatcctgatccccaagggggatttcatgacgggggcg
atggagctcaggggcccctgcaatggcgccgtgaccatccagctcgacggcaacctgctg
ggctccaacgacctcagcaagtacccgggcaagaagatgcccaactgggtcgaggtccgc
catgtcgacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtc
tggagcaagaactcctgcgccaagaactacaactgcaagctcctccccaacacgctggtg
ctgaacacggtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttc
cacatgaacatctaccggtgcaaggacataaagatcagcggcgtgaccatcaacgccccg
ggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgcc
gccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtc
aacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccgg
tacaaggacgagcgggacgtccgggacgtctccgtcacccgctgcgtcctccgcaagacc
accaatggcctccggatcaagtcgtacgaggactccgtgtcgccggtgaccgtgtccaag
gtgtcctacgacggcgtcgtcatggaccacgtcgacaaccccatcatcatcgaccagaag
tactgccccaacagcatctgcaccagcaagggcgactccaaggtgtccgtcagggacgtc
accttcaggaacatcaccgggtcgtccaacacgccggcggtcgtccagctgctctgctcc
ggcaagctgccgtgcagcggcgtcgcgatgcaggacgtcagggtgctgtacggcggcagc
gacaagaagaccacggccgtctgcgaccacgcgctggggaagtccaccgggtgcctcaag
gagctcgcttgcctctaa
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