KEGG   Oryza sativa japonica (Japanese rice): 4341516
Entry
4341516           CDS       T01015                                 
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00260  Glycine, serine and threonine metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00670  One carbon pool by folate
osa00785  Lipoic acid metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
Module
osa_M00532  Photorespiration
osa_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    4341516
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    4341516
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    4341516
   00670 One carbon pool by folate
    4341516
Enzymes [BR:osa01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     4341516
SSDB
Motif
Pfam: GDC-P GcvP2_C Beta_elim_lyase
Other DBs
NCBI-GeneID: 4341516
NCBI-ProteinID: XP_015643657
UniProt: Q69X42
LinkDB
Position
6:complement(join(25261880..25261974,25262084..25262201,25262481..25262579,25262668..25262793,25262876..25262953,25263042..25263230,25263862..25264014,25264461..25264574,25265252..25265437,25265521..25265646,25265729..25265924,25266014..25266114,25266209..25266286,25266383..25266628,25266739..25267929))
AA seq 1031 aa
MERARRLANRALLRRLLAAATAESPAAPSRGISTLAKGSRPRAPPRPAPHQYTTGRRPVS
ASALQPSDTFPRRHNSATPAEQAAMASECGFGTVDALIDATVPAAIRAPEMRFSGRFDAG
FTESEMIEHMQRLAAMNRAYKSFIGMGYYNTHVPAVILRNLMENPAWYTQYTPYQAEIAQ
GRLESLLNYQTMVADLTGLPMSNASLLDEATAAAEAMAMCNGILKSKKKTFLIASNCHPQ
TIDVCQTRAAGFDLNVVVADAKDFDYGSGDVCGVLVQYPGTEGEVLDYAEFVRDAHAHGV
KVVMATDLLALTSLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRI
IGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIA
DRVHGLAGTFAQGLKKLGTVTVQELPFFDTVKVKVADANAIAQEACKNEMNLRVVDATTI
TVAFDETTTLEDVDKLFKVFNGGKPVNFTAESLAPEVSSSIPSSLVRKSPYLTHPIFNMY
HTEHELLRYLYKLQSKDLSLCHSMIPLGSCTMKLNATVEMMPVTYPNFANMHPFAPTDQA
AGYHEMFDDLGDLLCKITGFDSFSLQPNAGASGEYAGLMVIRAYHRARGDYHRDVCIIPV
SAHGTNPASAAMCGMKIVAVGTDSKGNINIEELRKAAEANKDNLAALMVTYPSTHGVYEE
GIDEICMIIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMG
PIGVKKHLAPFLPSHPVITTGGFPLPEKTDPLGTISAAPWGSALILPISYTYIAMMGSKG
LTDASKIAILNANYMTKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKTTAGIEPEDVAKRL
MDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIESGKADVNNNVL
KSAPHPPQLLMSDSWTKPYSREYAAFPAAWLRGAKFWPTTCRVDNVYGDRNLICTLQQGS
QVAEEAAAATA
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggagcgcgcacgccgcctcgccaaccgcgcgctgctgcgccgcctcctcgcggcggcg
acggcggagtccccggcggccccgtcccgcggcatctcgaccctggccaaggggtcgcgc
ccgcgcgcccccccacgcccggcgccccaccagtacaccacggggcggcggcccgtgtcg
gcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcggcgacgccggcg
gagcaggcggcgatggcgtcggagtgcgggttcggcaccgtcgacgcgctcatcgacgcc
accgtcccggccgccatccgcgcgccggagatgcgcttctccgggaggttcgacgccggg
ttcaccgagtccgagatgatcgagcacatgcagcgcctcgccgccatgaacagggcctac
aagtccttcatcgggatggggtactacaacacccacgtccccgcggtgatcctgcgcaac
ctcatggagaacccggcgtggtacacgcagtacacgccgtaccaggcggagatcgcgcag
ggtcgcctcgagtcgctgctcaactaccagaccatggtcgccgacctcaccggcctcccc
atgtccaacgcctcgctgctcgacgaggccaccgccgccgccgaggccatggccatgtgc
aacggcatcctcaagtccaagaagaagaccttcctcatcgcctccaactgccacccgcag
accatcgacgtgtgccagacgcgcgccgccgggttcgacctcaacgtcgtcgtcgcggac
gccaaggacttcgactacggcagcggcgacgtgtgcggggtgctcgtgcagtaccccggc
acggagggggaggtgctggactacgcggagttcgtcagggacgcgcacgcgcacggcgtc
aaggtggtcatggccaccgacctgctcgcgctcacctcgctgcgcccgcccggcgagatc
ggtgccgacatcgccgtcggctccgcgcagcggttcggcgtgcccatggggtacggcggc
ccgcacgccgcgttcctcgccacgtcccaggagtacaagcgcctcatgcccggccgcatc
atcggcgtcagcgtcgattccagcggcaagcccgcgctccggatggcgatgcagacccgg
gagcagcacatccgccgcgacaaggccaccagcaacatctgcactgcccaggccttgctc
gccaacatggcagcgatgtatgctgtctaccatggtcccgaggggctaaaggcaattgcc
gaccgtgtacatggactggctggtacatttgcccaaggattgaagaagctcggaacagtg
acggtgcaggagctgcccttcttcgacactgtcaaggtcaaggtcgctgacgcgaatgcg
attgcccaggaggcctgcaagaacgagatgaaccttcgtgtcgttgatgcaaccacgata
accgttgcctttgatgagaccacaaccttggaggatgtcgacaagctgttcaaggtgttc
aatggtggcaagccagtgaacttcactgctgaatccctcgcaccagaggtctcaagctca
attccgagtagccttgtgcgcaagagcccctacttaacccacccgatctttaacatgtac
catacagagcatgagcttctccgctacctgtacaagttgcaatccaaggacctttcactg
tgccacagtatgatccctcttggttcttgcactatgaaactaaatgctacagtggagatg
atgcctgtcacctaccccaactttgcaaacatgcacccatttgcacctactgaccaagcc
gcaggatatcatgaaatgtttgatgacttgggcgatctgctgtgcaagatcactggcttt
gattctttctctttgcaaccaaatgctggtgcttcaggggagtatgccggattgatggtt
atccgtgcttaccacagggcaagaggagactaccaccgggatgtctgtatcattcctgtg
tcagcccatggtacaaatcctgcaagtgctgctatgtgtggaatgaagattgttgctgtt
ggaactgattccaaaggtaacattaacatcgaggagttgaggaaagctgctgaagcaaac
aaggacaacttggctgctcttatggttacctatccttcgacccatggagtctatgaagaa
ggcattgatgagatatgcatgataattcatgagaacggtgggcaggtctacatggatgga
gctaacatgaatgctcaggtcggattgacaagccctggctttattggagcagatgtttgc
caccttaaccttcacaagacattctgcattccacatggtgggggtggtcctggaatgggt
cctattggtgttaagaagcacttagcaccatttttaccatctcatccagtgatcaccacc
ggtggcttccctctccctgagaaaaccgaccctcttggtaccatttctgctgccccatgg
ggatcagcgttgattctaccaatttcctacacatacatagccatgatgggttctaagggt
ctcactgatgcttcaaagattgcaatcttgaatgcaaactacatgacaaagcgtctggag
aaacactacccagttcttttccgtggagtcaatggaactgttgcccatgagttcattatt
gatttaagaggatttaagacgactgctggtatagagccagaggatgttgcaaagcgtttg
atggactatggattccatgcacctactatgtcatggcctgttccaggcacacttatgatt
gaaccaactgaaagtgaaagcaaggccgaactagataggttctgtgatgctctaatctca
atcagggaagaaattgcagagatagaaagtggcaaagcagatgtgaacaacaacgtcctc
aagagtgctcctcacccgccccaacttctgatgagcgactcatggactaagccgtactcc
agggagtatgctgcgttccctgcagcgtggcttcggggcgccaagttctggccaacaaca
tgtcgcgtggacaatgtgtacggggatcgcaacctcatctgcactctgcaacagggatcc
caagtcgcagaagaagctgcagctgctaccgcatga

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