Oryza sativa japonica (Japanese rice) (RefSeq): 4341706
Help
Entry
4341706 CDS
T01015
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4341706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4341706
Spliceosome [BR:
osa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
4341706
Complex C
U5 SnRNP specific factors
4341706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Nup160
Motif
Other DBs
NCBI-GeneID:
4341706
NCBI-ProteinID:
XP_015643086
UniProt:
Q0DAG8
Q67WC9
LinkDB
All DBs
Position
6:complement(26778934..26781812)
Genome browser
AA seq
343 aa
AA seq
DB search
MFPPGNNSLALSAPRPGMELANIQQHPNQALGPGGKQRTSSLEAPIMLLTGHQSAVYCMK
FNPAGTVIASGSHDKDIFLWYVHGDCKNYMVLRGHKNAVLDLQWTTDGTQIISASPDKTV
RVWDVETGKQVKKMAEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDK
YQITAVSFSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSYLLTN
AMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKVTAGSADRMVYIWD
TTSRRILYKLPGHNGSVNETAFHPTEPVIGSCGSDKQIYLGEL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttccccccaggcaacaattctttggctctttcagccccaaggccaggaatggagctg
gctaacattcaacagcatcctaatcaagctcttgggcctggtgggaagcaacgtacatcc
agtctggaggccccaataatgctactcacaggccatcagagcgctgtgtactgtatgaag
ttcaaccctgcaggaactgtgatagcatcaggctcccatgacaaggatatcttcttgtgg
tatgtccatggtgactgtaagaactacatggtactgagagggcacaagaatgctgttctt
gaccttcaatggactactgatgggactcagatcatctctgcaagccctgacaagactgtg
agagtgtgggacgttgagactggcaagcaagtcaagaagatggccgagcactcatctttt
gtcaactcatgttgcccggctcgaaagtggccacctctggttgtaagtggatcggatgat
ggaacagcaaagctgtgggatttgcgtcaaagaggtgctatacaaacacttcccgacaag
taccagattacagccgtcagcttctcagaggcggcagataaggttttcactggtggccta
gacaatgatgtcaaatggtgggatctccgtaagaatgaagtgacagagtatctcaaagga
caccaggacatgataaccggaatgcagcttagtccagatgggtcttatctcctaaccaat
gcaatggacaatgagctcaaaatctgggacttgcgcccttacgccccagagaaccggaac
atcaagaccctcacaggacaccagcataactttgagaagaacctgttgaagtgcagctgg
tcccctgataatcgcaaggtcactgccgggagtgctgatcgcatggtctacatctgggac
acaacatcaaggcggatcttgtacaagcttcctggccacaacggttctgtcaacgagacc
gcattccatcccaccgagcctgtcattggatcttgcggcagtgacaagcagatttatctt
ggggagctttaa
DBGET
integrated database retrieval system
