Oryza sativa japonica (Japanese rice): 4341706
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Entry
4341706 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K12857
Prp8 binding protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4341706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4341706
Spliceosome [BR:
osa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
4341706
Complex C
U5 SnRNP specific factors
4341706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_RIG_1st
PEP5_VPS11_N
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
4341706
NCBI-ProteinID:
XP_015643086
UniProt:
Q0DAG8
Q67WC9
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All DBs
Position
6:complement(27643355..27644386)
Genome browser
AA seq
343 aa
AA seq
DB search
MFPPGNNSLALSAPRPGMELANIQQHPNQALGPGGKQRTSSLEAPIMLLTGHQSAVYCMK
FNPAGTVIASGSHDKDIFLWYVHGDCKNYMVLRGHKNAVLDLQWTTDGTQIISASPDKTV
RVWDVETGKQVKKMAEHSSFVNSCCPARKWPPLVVSGSDDGTAKLWDLRQRGAIQTLPDK
YQITAVSFSEAADKVFTGGLDNDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSYLLTN
AMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKVTAGSADRMVYIWD
TTSRRILYKLPGHNGSVNETAFHPTEPVIGSCGSDKQIYLGEL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttccccccaggcaacaattctttggctctttcagccccaaggccaggaatggagctg
gctaacattcaacagcatcctaatcaagctcttgggcctggtgggaagcaacgtacatcc
agtctggaggccccaataatgctactcacaggccatcagagcgctgtgtactgtatgaag
ttcaaccctgcaggaactgtgatagcatcaggctcccatgacaaggatatcttcttgtgg
tatgtccatggtgactgtaagaactacatggtactgagagggcacaagaatgctgttctt
gaccttcaatggactactgatgggactcagatcatctctgcaagccctgacaagactgtg
agagtgtgggacgttgagactggcaagcaagtcaagaagatggccgagcactcatctttt
gtcaactcatgttgcccggctcgaaagtggccacctctggttgtaagtggatcggatgat
ggaacagcaaagctgtgggatttgcgtcaaagaggtgctatacaaacacttcccgacaag
taccagattacagccgtcagcttctcagaggcggcagataaggttttcactggtggccta
gacaatgatgtcaaatggtgggatctccgtaagaatgaagtgacagagtatctcaaagga
caccaggacatgataaccggaatgcagcttagtccagatgggtcttatctcctaaccaat
gcaatggacaatgagctcaaaatctgggacttgcgcccttacgccccagagaaccggaac
atcaagaccctcacaggacaccagcataactttgagaagaacctgttgaagtgcagctgg
tcccctgataatcgcaaggtcactgccgggagtgctgatcgcatggtctacatctgggac
acaacatcaaggcggatcttgtacaagcttcctggccacaacggttctgtcaacgagacc
gcattccatcccaccgagcctgtcattggatcttgcggcagtgacaagcagatttatctt
ggggagctttaa
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