KEGG   Oryza sativa japonica (Japanese rice): 4341808
Entry
4341808           CDS       T01015                                 
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial
  KO
K17680  twinkle protein [EC:5.6.2.3]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:osa03029]
    4341808
Enzymes [BR:osa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     4341808
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    4341808
SSDB
Motif
Pfam: Toprim_4 DnaB_C Toprim Toprim_2 AAA_25 Viral_helicase1 ATPase_2 AAA_29 Toprim_3
Other DBs
NCBI-GeneID: 4341808
NCBI-ProteinID: XP_015641145
LinkDB
Position
6:join(28732472..28732724,28733223..28733353,28733917..28733972,28734066..28734123,28734202..28734345,28734502..28734585,28734666..28734746,28734827..28734892,28735008..28735121,28735284..28735331,28735428..28735513,28735608..28735668,28736575..28736757,28737219..28737350,28737429..28737490,28737730..28737813,28738131..28738262,28738785..28738881,28738969..28739103,28739220..28739287,28739452..28739548)
AA seq 723 aa
MPPRPSLQSLLLMAASAAAGGDSGLLLAARRRLPAAALAAGGHRIRLLHAFSAASRRGRH
EVACCVRTEPAPRPASPVAVRSRSVHSTENYKKGCEQRLGQLIERLKKEGISPKQWRLGT
YQRMMCPKCNGGSTEEPSLSVMIRMDGKNAAWQCFRANCGWKGFVEPDGVLKLSQAKNNT
ECETDQDGEANLAVNKVYRKICEEDLHLEPLCDELVTYFSERMISPETLRRNSVMQRNWS
NKIVIAFTYRRDGVLVGCKYREVSKKFSQEANTEKILYGLDDIKRARDIIIVEGEIDKLS
MEEAGYRNCVSVPDGAPPKVSSKLPDKDQDKKYQYLWNCKEYLDPASRIILATDADPPGQ
ALAEELARRLGKERCWRVNWPKKNENEICKDANEVLMFLGPQALRKVIEDAELYPIRGLF
SFKDFFPEIDNYYLGIRGDELGVPTGWKSMDELYKVVPGELTVVTGVPNSGKSEWIDALL
CNINDQVGWKFVLCSMENKVREHARKLLEKRIKKPFFDARYGGSAERMSLDEFEEGKQWL
NETFHLIRCEDDCLPSVNWVLELAKAAVLRYGVRGLVIDPYNELDHQRPSNQTETEYVSQ
MLTKIKRFAQHHSCHVWFVAHPRQLHNWNGGPPNMYDISGSAHFINKCDNGIVIHRNRDP
NSGPLDVVQVCVRKVRNKVIGQIGDAFLSYERVSGEFRDADKDTAKKAAVAAANVAKAPQ
RKG
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgccaccgcgcccctccctccagtcgctcctcctcatggccgcctccgctgccgccggc
ggggactccggcctcctcctcgccgcgcgccgccgcctccccgccgccgccctcgccgcg
gggggccaccgtatccggctgctccacgccttctccgccgcgagccggcgggggaggcac
gaggtggcctgctgcgtcaggactgaacccgcgccgcggcccgccagccccgtcgccgtt
cgctccaggagtgttcattcaacggaaaactacaaaaagggttgcgagcagcgactagga
cagttaattgagagactgaagaaagaaggaataagtccaaagcaatggaggcttggtact
tatcaacgaatgatgtgcccaaagtgcaatgggggatctactgaggagccgagcctcagt
gttatgatccgaatggatgggaaaaatgctgcatggcaatgttttagagctaattgtggt
tggaagggttttgtcgagcctgatggagttctcaaactatcacaagcaaaaaataataca
gaatgtgaaacggaccaggatggtgaagctaatctggcagtcaataaggtttacagaaaa
atttgtgaggaggacctccatcttgagccactttgcgatgagcttgtaacatacttctca
gagagaatgatatcgccagaaacacttcggagaaacagcgtaatgcagcgtaactggagt
aataagatagttattgctttcacctacaggcgtgatggggtcctcgttggctgcaaatac
agggaagtctctaagaaattttcacaggaagcaaacacagagaaaattttatatggtctg
gacgatataaagcgagcacgagatattatcattgttgagggtgaaattgataagctctca
atggaagaagctggctaccgtaattgtgtcagtgtaccagatggtgcaccaccgaaagta
tccagcaagctcccagataaagatcaggataagaagtaccaatatctgtggaattgcaaa
gaatatcttgacccggcgtctaggataatactggcaacagatgctgatcctccagggcag
gctctggctgaggaacttgctcgtcgtcttggtaaagaaagatgctggagggtcaattgg
ccaaagaagaacgagaacgaaatttgcaaagacgcaaatgaggtactgatgtttttagga
ccacaagcattgagaaaggttatagaagacgcggaactgtatcccataagaggtcttttc
tccttcaaagatttcttccctgagatcgataattattatcttggaatccgtggggatgag
cttggtgttcctactggatggaaatccatggatgagctttacaaggttgttcctggggag
ttgactgtagtaacaggagtgccgaattctggtaaaagtgagtggattgatgctttactg
tgcaatataaatgaccaggttgggtggaaattcgttctgtgctcaatggaaaacaaggtc
agggagcatgctagaaagctcttagagaagcgcattaagaaaccattctttgatgctaga
tatgggggctctgcagaaagaatgagtctagacgaatttgaagaaggcaagcaatggctg
aatgaaacattccatctgatccggtgtgaagatgattgccttccatctgttaattgggtt
ctcgagcttgctaaagctgcagttctaagatatggagtgcgtggtcttgtgattgatccc
tacaatgaacttgatcaccaacgcccctcaaatcaaaccgaaacagaatatgtcagtcag
atgcttaccaagattaagcggtttgctcagcaccattcttgtcatgtttggtttgttgcc
caccctagacagcttcataactggaatggtggtcctcctaatatgtatgacatcagtgga
agcgcacatttcataaacaaatgtgataatggaattgtcatccatcgaaacagggatcca
aacagtggcccacttgatgttgtgcaggtttgtgtgaggaaggtgcgcaacaaagtgatt
ggacaaataggagatgctttcttgtcatatgaacgggttagtggtgagttcagggatgct
gataaagatactgcaaagaaggctgctgttgcagccgctaatgtagcaaaagccccacag
aggaaaggatag

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