Oryza sativa japonica (Japanese rice): 4341882
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Entry
4341882 CDS
T01015
Symbol
ARF10, ARF18, OsARF10, P0623A10.1
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
4341882 (ARF10)
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
4341882
NCBI-ProteinID:
NP_001408669
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All DBs
Position
6:join(29453679..29454803,29454958..29455865,29456402..29456471)
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AA seq
700 aa
AA seq
DB search
MITFVDSAAKERERESDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVE
FPGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAA
QEEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKF
RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFL
PPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQ
PFEVVYYPRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQV
ADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPL
YPELPIDGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLNKLQS
SLSPHGLHQLDHGMQPRIAAGLIIGHPAARDDISCLLTIGSPQNNKKSDGKKAPAQLMLF
GKPILTEQQISLGDAASVDVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTTDNLSCGGVP
LCQDNKVLDVGLETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMSHV
FYRDAAGALKHTGDEPFSEFTKTARRLNILTDTSGDNLAR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgataactttcgtggattccgcggcgaaggagcgggagcgggagagtgacaagtgcttg
gacccgcagctgtggcacgcctgcgccggcggcatggtccagatgccgccggtgagctcc
aaggtgtactacttcccgcaaggccacgccgagcacgcgcaggggcatggccccgtcgag
ttcccgggcgggcgcgtcccggcgctcgtgctctgccgcgtcgcgggcgtcaggttcatg
gccgatccggacaccgacgaggtgttcgccaagatccgcctcgtccccgtccgcgccaac
gagcagggctacgccggtgacgccgacgacggcattggcgccgccgcggccgcggcggcg
caggaggagaagcccgcgtcgttcgccaagacgctcacgcagtccgacgccaacaacggc
ggggggttctccgtgccgcgctactgcgccgagaccatcttcccgcgtctcgactactcc
gccgatccccccgtccagaccgtcctcgccaaggacgtccatggcgtggtctggaagttc
cgccacatctaccgcggcacgccgaggcgccacctcctcaccacggggtggagcaccttc
gtgaaccagaagaagctcgtcgccggcgactccatcgtgttcatgcgcaccgagaacggg
gatctctgcgtcggcatccgccgcgccaagaaagggggcgtgggaggcccggagttcctg
ccgccgccgccgccgccgccgccgacacctgccgccggcggcaattacggcgggttctcc
atgttcctgaggggcgacgacgacggcaacaagatggcggcggcggccaggggcaaggtc
agagcccgtgtccggccagaggaggtcgtcgaggcggccaatctcgccgtgagcgggcaa
ccattcgaggtcgtctactacccgagggcgagcacgccggagttctgcgtgaaggccggg
gcggtcagagcggcgatgcggacgcagtggttcgccggcatgaggttcaagatggcattc
gagacggaggactcatcaaggatcagctggttcatgggcactgtatcggccgtgcaggtt
gctgaccccattagatggcctaattcaccatggaggcttcttcaggtttcatgggatgaa
ccggacttgttacagaatgtgaagagggtgagcccatggttggttgagcttgtgtcaaac
atgccggccatccaccttgctccattctcgcctccacggaagaagctttgcgtgccgttg
taccccgagcttcccatcgacggccaatttccgacaccgatgttccatggaaacccgctc
gcccgtggggttggtcctatgtgctatttcccggatggcactcctgcaggcatacaggga
gccaggcatgctcaatttggtatatctttatcagatctccaccttaacaaactgcagtcg
agtctatcgccccacggccttcaccagcttgatcacggcatgcagccgaggatcgccgct
ggtctaattatcggtcatccggctgctcgggatgatatctcatgcttgttgaccattggt
agcccccagaacaacaagaaatcagatggcaagaaggcgccagcccagctgatgcttttc
ggaaaacccatactcacagagcagcagatatccttgggtgatgctgcttcggtggatgtt
aagaagagctcttctgatggtaatgctgaaaatacggtgaataagagtaactccgatgtt
tcaagcccgagaagtaatcagaatggcaccacagataatttgtcatgtggaggagttcca
ttgtgccaagacaacaaggtacttgatgttgggctggaaacagggcactgcaaggtattc
atgcagtcggaggatgtcgggcgcacacttgatctctctgttgttggttcatatgaggaa
ttataccggcggcttgctgacatgttcggcatcgagaaagctgagctgatgagtcatgtt
ttctaccgtgatgcggctggggcactcaagcacactggagatgaacctttcagcgagttc
acgaagacggcgcgtaggctgaatatactaacagatacaagcggcgataacttagcgagg
tag
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