Oryza sativa japonica (Japanese rice): 4341966
Help
Entry
4341966 CDS
T01015
Symbol
eIF-4A-1, OsJ_22532, P0596H10.2
Name
(RefSeq) eukaryotic initiation factor 4A-1
KO
K03257
translation initiation factor 4A
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4341966 (eIF-4A-1)
03012 Translation factors [BR:
osa03012
]
4341966 (eIF-4A-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4341966 (eIF-4A-1)
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
4341966 (eIF-4A-1)
mRNA cycle factors
Stress granule specific factors
4341966 (eIF-4A-1)
Translation factors [BR:
osa03012
]
Eukaryotic type
Initiation factors
eIF-4
4341966 (eIF-4A-1)
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4341966 (eIF-4A-1)
Exosomal proteins of bladder cancer cells
4341966 (eIF-4A-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
DUF2780
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
4341966
NCBI-ProteinID:
NP_001389863
LinkDB
All DBs
Position
6:complement(join(30370917..30371552,30371965..30372395,30372480..30372586,30372696..30372766))
Genome browser
AA seq
414 aa
AA seq
DB search
MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRE
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR
PDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatggcaccagagggatcccagtttgatgctaagcactatgattctaaaatg
caggagcttctgaaccaaggtgaaaccgaggagttcttcacatcttatgatgaagttcat
gagagttttgatgacatgggtctccaagagaaccttctcagaggcatctatgcctatggt
ttcgagaagccttcagccattcagcaaaggggtattgtccctttctgcaagggtcttgat
gtgattcagcaagctcagtcaggaacaggaaagactgccaccttctgttctggaattttg
cagcaacttgactatgctgtggttgagtgccaggccttggtccttgctcctactcgtgag
cttgcacagcaaattgagaaagtcatgcgcgcacttggtgactatctgggtgtgaaggtt
catgcttgtgttggaggtacttctgttcgtgaggaccaaaggattcttgcaagtggagtg
catgttgttgttggaacacctggtcgtgtgtttgacatgctgcgtaggcagtccctccgt
cctgattacatcaagatgtttgtccttgatgaagctgatgaaatgctttctcgtggtttc
aaggatcagatttatgatatcttccagctcctcccgtcaaagatccaagttggtgtgttc
tctgctacaatgccccctgaggcccttgagatcacccgtaaattcatgaacaagcctgtg
cggatccttgtgaagagggatgagctcactcttgagggtatcaaacagttttatgtcaat
gtggagaaggaagaatggaagcttgacacactctgtgacctgtatgagacactggccatc
acgcagagtgtcatctttgtgaacacccgccgcaaggtggactggctcactgataagatg
aggggcagggatcacacagtttctgctacccatggtgacatggaccagaacactagggac
atcatcatgagggagttccgatctggttcttcccgtgtgctcattaccacggaccttctt
gcccgtggtattgatgtccagcaggtgtcccttgtcatcaactatgatctgccgacccaa
cctgagaactacctgcatcgcattggtcgtagtggtcgttttggtaggaaaggtgttgcc
attaactttgtgacccgtgacgatgagaggatgctgtttgacatccagaggttctacaat
gtggtgattgaggagctgccggccaacgtcgctgaccttctgtga
DBGET
integrated database retrieval system
