Oryza sativa japonica (Japanese rice): 4342125
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Entry
4342125 CDS
T01015
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00520
Amino sugar and nucleotide sugar metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
4342125
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
osa01003
]
4342125
Enzymes [BR:
osa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
4342125
Glycosyltransferases [BR:
osa01003
]
Polysaccharide
Structural polysaccharide
4342125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
4342125
NCBI-ProteinID:
XP_015643074
LinkDB
All DBs
Position
6:complement(join(31819120..31819398,31819553..31820525,31820653..31820987,31821130..31821240,31821331..31821477,31821547..31821592,31821686..31821750,31821900..31821971))
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AA seq
675 aa
AA seq
DB search
MFPLRRRPGFLAVVLLLLLFLSFQLLIHVPSVGSALSLCLFSDHHTERKGPGSCHGCRNV
QGMDDADKTIAYTDQDGRIKLFKVTMTEFLSSSIWKNPLQPKDTQPLAQTQEIAKEQLPD
TGSEISNISTTGTLETRRNDPIKLKRVVFRRKRKEDRTQELLQVDREAELNMRNVATDRS
RNFSNKVRASYNIWRPGFHHTNTDSTLRLMKDQIIMAKVYATIAHSQKQPDLYVLLMTCI
KQSQEGIGDAHMDYKLDLSALERAKAMGHALSSARDVLYNSGEVSRRLRVMLQSTELNID
SVKKQNSFLVQHAAKTVPMPLHCLHMQLTTDYHFRDGVVKEYFRDAALKEEEDKAKREDR
SLYHYAIFSDNVLAASVVVRSTVTHAKEPEKHVFHIVTDRLNFAAMTMWFISNPPLPATV
HVENIDNFKWLNSSYCSVLRQLESARLKEYYFKAHDPSSLSDGNENLKYRNPKYLSMLNH
LRFYMPEIHPKLDKILFLDDDVVVQKDLTPLWDVDLKGIVNGAVETCKESFHRFNTYLNF
SHPKISENFDPHACGWAFGMNMFDLKEWKKQNITGIYHYWQDLNEDRKLWKLDTLPPGLI
TFYNLTYPLNRTWHVLGLGYDPSVDLVEIENAAVVHYNGNYKPWLDLAISKYKPYWSKYV
DLDNSHIQRCYMSEQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgctccgccgccgccccggattcctcgccgtcgtccttctcctcctccttttc
ctctccttccagctcctgattcatgtcccctctgtcggatcggcactgtccctatgtctc
ttctccgatcaccacaccgagcgcaagggtcctgggagctgtcatggatgccgcaatgta
cagggcatggatgatgccgataagacgattgcttacacggaccaggatggtcggatcaag
ctcttcaaagttaccatgacagaattcctctcgtcctctatctggaagaatcctttgcaa
ccgaaagatacccaaccactagctcaaactcaagaaattgcgaaggagcagctaccagac
actgggtcagaaatctcaaatatttcaaccacaggaactttggaaaccagaagaaacgat
ccgattaaattaaagagagtggtattccgacgcaaaagaaaggaggataggacccaggag
ttgcttcaggtggacagggaggctgaactcaacatgagaaatgtggccacagacagatca
aggaacttcagtaataaagtaagagccagctacaacatatggaggccggggtttcaccat
actaacacagattcaaccctcagactcatgaaagatcagattataatggccaaggtgtat
gccacaattgcacattcccagaagcaacctgacctgtacgtgttgctcatgacatgcata
aaacaaagccaagaaggtattggggatgcacacatggattacaaacttgatttgagtgct
ttagagcgagcaaaagcaatggggcatgccctgtcttcagctagagatgttctgtacaac
tctggtgaagtatccagacgattgcgtgttatgctacagtctacagaactaaatatcgat
agtgttaagaagcagaactcattcctggtgcagcatgctgcaaagacagtccccatgcct
ttgcactgtctgcatatgcagctgacaaccgattatcattttcgtgatggtgtggtcaag
gaatattttcgtgatgctgctttgaaggaggaagaagataaggcaaagcgtgaggatcgg
tctctataccactacgctatattttcagataacgtccttgcagcctcagtagttgttaga
tcaacggtgacacatgccaaggaaccagagaagcatgtattccacattgtcactgataga
cttaattttgcagctatgacaatgtggttcataagcaatcctcctctacctgctactgtc
catgtggaaaacattgacaacttcaagtggctcaattcgtcatactgttcagttctacga
caacttgagtcagctcggctcaaagagtactatttcaaagcacatgatccatcgtcactc
tctgatggaaatgaaaatctgaagtacaggaaccccaaatatctgtctatgcttaaccat
ctaaggttctacatgccagaaatacaccccaagcttgacaagatactgtttctcgatgac
gatgttgttgtgcagaaggacttgacaccgctatgggatgttgatcttaaagggatagta
aatggtgcagttgaaacctgcaaagaaagtttccatcgcttcaacacatacctcaatttc
tcacacccaaagatctcagagaactttgatccacatgcttgtgggtgggcttttgggatg
aacatgtttgacctgaaagagtggaagaagcaaaatatcactggaatataccattattgg
caagatctgaatgaggatcgtaagctgtggaagctggatacattgcctccaggactgatt
actttctacaacctgacatacccattgaatcgcacttggcatgtgttgggccttggctat
gatccatctgttgaccttgttgagattgagaatgcagcagtagttcattacaatgggaat
tacaagccctggctagaccttgccatttccaagtacaagccctactggtccaagtatgta
gatcttgacaactcacacattcaacgctgctacatgagtgagcaataa
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