KEGG   Oryza sativa japonica (Japanese rice): 4342227
Entry
4342227           CDS       T01015                                 
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
  KO
K06672  cohesin loading factor subunit SCC2
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4342227
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    4342227
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT PDS5 Cnd1 INTS1_R4 HEAT_2 zf-RING_2 PHD zf-HC5HC2H DUF6025
Other DBs
NCBI-GeneID: 4342227
NCBI-ProteinID: XP_015647184
LinkDB
Position
7:join(578107..578339,578419..578543,582416..582552,582649..582754,582847..583097,583230..583340,583421..583532,583838..583928,584016..584202,584288..584719,584890..585416,585486..585693,585784..585834,585924..586082,586168..586332,586944..587243,587319..587471,588231..588400,588950..589064,589674..589835,590001..590105,590181..590411,590489..590622,590696..590950,591034..591322,591426..591518,591607..591732,591858..592109)
AA seq 1759 aa
MDPGRGGRRRAGFERACRLPNTVHSEIASALPLPTLPLNLGAGLLDDDDPLADPDRPDMI
MQAANIARILADTDVSHLGFTEADNVETDPSQCSWLWREVLKHNPDAFTIKPRPLPPSQD
PLEGQENQNQEHEKHFAHVAPNFNSMRKDHGFPRDDPIPHSEHLNNDLTQDPVASKKPKV
RKKEIHNSASSSDPSIPNSQEVIANFCEMVEDFCGRVEIPDDADGDEWLSIPLNDAKVLV
NEITFVRSKKILHEIPMDTLTRLLHVIDRQIRCSQGLSIDVKENADAADAEPLVFSALES
IHAALAIMTHHDMPKQLYREELIERILDFSRHQIIDCMAASNPTFRALYKPAEKVTNDGD
EDEEVMGNGPANKRRRTANLSMRKSSTNKVSASIHSAVQKLCLILGFLTELLTTVRLSDS
CILQLAKTCFTTFLVDNMQLLQLKAIGVICTVFSSYTQHRTYLVDETLVLLRKLQFSKNA
IRTYHLADEEHKQIQMITALLVHLVQFSANVPDGLKGTVNWSTIVDASIDASYPIKCYEA
ATEACCLFWTNVLQRFTAAKSQDMSEAKGIIDNLVQDLLTILNLPEYPAAAPVLEVLCVL
LLQNAGLKSKDTSARCFAIDLLGGIASRLKRDSVICSKEKLWILQELTDTESDGSKILKN
KCCICLGGRGINMQCDVCGRCFHSDCVGAVSQENLQCDYACPLCFCKRQLSVLQSYYELQ
NKENGKRNAASHRKKSTVPDEVTAVDIVQQILLTYIQEGGPQDDGNLFTRWFYLCMWYKD
DPHSQEKIIYYLARLKTKDILRDSGNGLVLSRDWAKKICLALGQKNSFSRGFDKILSLLL
ASLRENSPVIRAKALRAVSSIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRH
IASHPDVGLKYIEKVAERIKDTGVSVRKRAIKIIRDLCASNPNTDTTRAFVEIISRVNDE
ESSVQDLVCKTFYELWFEEPTGSHKHLVADGSSVPMEIAVKTEQIVDMLRKMPNHLPLIT
IVKRNLALDFLPQSAKATGINSSFMASLRKRCELICKRLLERILQVEEGAASETEVHALP
YVLALQAFCIVDPTLCTPATQPFQFVETLQPYLKKQVDNKSTAQLLESIIFVIDAVLPLI
WKPPQSVVIELEQDLKQMIVRHSFLTVVHACIKCLCALSKAADRGPRLLEYLVNIFYKHL
SGSNSSNSDSQLLGRSLFCLGLLLRYGSQLMAASENQLDFPKIISLLKKEYLLKDDFSLK
VRGLQALGYILIAKPDFMLRKDISTLIESSLSSVVDYRLKIQGLQNLFEYLRDAESQLNA
ESTGKPTPNATNGGSEVPVAAGAGDTNICGGIIQLYWNSILERCLDINDQVRQTALKIVE
IVLRQGLVHPITCVPHLIALETDPLEGNSKLAHHLLMNMNEKYPSFFESRLGDGLQMSFR
FFESTISNHDMVATNMKSNPIAFVKPGISRIYRLIRANRNSRNKFVHSIVRKFEGDNRSY
PTISFLMYCAEVLASLPFTSPDEPLYLIYDINRVIQLRAGAVEANLKNWTSMYQQQEMVG
MPRDTGDVMHEPGGCSDQNLVDVSQMMLGNTCSTPVVNMAKLQEDCHGAIALQLLLKLKR
HLKTVYSLTDARCQAFSLKDPPKSGETISKQNIPLNISNTNTSLPSCPQDAARVYQDFKT
VLREDTVDYGMYTVSAQKKRPTPRSSSRVRRPAAVTRGRGGGGGGGDEDTDDEDWTGGGA
RVLDFSAQGGRVTRQRVQV
NT seq 5280 nt   +upstreamnt  +downstreamnt
atggaccccggccgaggcggacgccggagggccggcttcgagcgcgcctgccgcctgccc
aacaccgtccactccgagatcgcctccgcgctcccgctccccacgctcccgctcaacctc
ggcgccggcctcctcgacgacgacgaccccctcgccgaccccgaccgccccgacatgatc
atgcaggccgccaacatcgcccgcatcctcgccgacaccgacgtctcccacctgggcttc
acggaggcggacaacgtcgagacggaccccagccagtgctcctggctctggagggaggtg
ctcaagcataaccccgacgccttcaccatcaaaccccgccctctcccgccttcccaagat
ccccttgaaggccaagaaaatcaaaatcaggagcatgagaagcattttgcgcatgttgcg
ccaaactttaatagcatgcgaaaggaccatggatttcctcgggatgaccctatcccacat
agcgagcatcttaataatgatctaacacaagatccagttgcttcaaagaagccaaaagtt
aggaagaaagaaatccataattctgcttcaagttctgaccctagcattcctaatagtcaa
gaagttatcgccaacttctgtgagatggtagaagatttctgtggaagagtagaaattcct
gatgatgcagatggtgatgagtggctatcaattccactgaatgatgctaaagttcttgta
aatgaaatcacatttgttcggtcaaaaaagattttgcatgagattccgatggatacactt
acaaggctattacatgtgatagaccgtcagatccggtgttctcaaggtttatcaatagac
gtgaaggaaaatgctgatgctgcagatgctgaacccttggttttctctgctttggagtcc
attcatgcagcattagctataatgacccaccatgacatgccaaagcagctgtatcgagaa
gaacttattgagagaattcttgatttctcacgacatcagatcattgattgtatggctgca
agtaacccaacctttcgagctctttacaaaccagctgaaaaagtcacaaatgatggggat
gaggatgaagaagtcatgggaaatggaccagctaacaaaaggaggcgtactgctaattta
agcatgagaaaatcttctacaaacaaagtttctgcctctatacattcagctgtacagaaa
ctgtgcttgatattgggctttcttacggaactcctgacaacagtgcgcttatcagatagt
tgtattttgcaattagcaaaaacatgctttaccacattcctggtggacaatatgcaactt
ttacaattgaaagcaattggtgtcatttgcacggttttttcatcatacacacaacacagg
acatacttggttgatgaaacacttgttcttcttcgtaagctacagttttcaaaaaatgct
attagaacttaccatctagcagatgaagaacataagcaaatccagatgataacagcattg
ttagttcacctggttcagttcagtgcaaatgttcctgatggtttaaagggaacggtgaac
tggagcactattgttgatgcatcgatagacgctagttatccaatcaaatgctatgaagca
gcaacggaggcttgctgccttttttggaccaatgtgcttcaacgtttcactgctgctaaa
tctcaggatatgtcggaagccaaagggattatagataatcttgtgcaggacttgctaact
atactaaatttgcctgagtatccagctgctgccccagtacttgaggttctctgtgtgttg
ctgcttcaaaatgctggattgaaatcaaaggacacctctgctcgctgttttgctattgat
cttcttggtggtattgcatcaaggttgaaacgtgattcggttatctgtagcaaggagaag
ctttggatattgcaagaactcactgatactgaaagtgatggctcgaaaatcttaaagaat
aaatgctgtatttgtcttggtggaagaggtataaatatgcaatgtgatgtctgtggaaga
tgtttccattcagattgtgtgggtgctgttagtcaggaaaacctacagtgtgattatgcc
tgtccattatgcttttgcaaacggcagctcagtgtgttacagtcatattatgagttgcaa
aataaagagaatggcaaaagaaatgctgcctctcatcggaagaaatccactgtacctgat
gaggtgacagctgtggatattgttcaacaaatacttttgacttatatccaggaaggtggt
ccacaagatgatggaaatttgtttacacgatggttctatctctgcatgtggtacaaagat
gatccacattctcaagagaagatcatctactatcttgccagactgaaaactaaagacatt
ctgcgggattctggcaatggtttggtattatccagagattgggctaagaaaatttgtttg
gcacttggccagaagaactcattttctagagggttcgataaaatcctttccctccttttg
gctagcttgagagaaaattctcctgtaataagagcaaaggccttgcgtgcagtcagcagt
atagtcgaagctgatcctgaggtgttgggtgacaaacgtgtccagtctgctgttgaagga
aggttttgtgactcagctatttctgtccgtgaagctgcgcttgagcttgtgggtagacac
attgcttcacatcctgatgtcggcctgaagtatattgagaaagtggctgagcggataaag
gacacaggagtaagtgttcgcaaacgtgcgatcaaaatcatccgcgatctgtgtgcttca
aatccaaacacggacactactcgtgcctttgtggagataatttctcgtgttaatgacgag
gagtctagtgtacaggatcttgtatgcaaaacattttatgagctatggtttgaagaacca
actgggagtcataagcacttggttgctgatggtagttcagttcctatggagattgcagta
aagaccgaacaaattgttgacatgttgagaaagatgcccaatcacctacccctcattacc
attgtaaagcgcaacttggctcttgatttccttccacagtcagctaaggccacaggcatt
aactcatcatttatggcatctctaagaaagcgttgtgagttgatatgtaagcgcttgttg
gaaagaatactgcaggtggaagagggagctgctagtgagactgaagtccatgcacttcct
tatgttcttgccttgcaagcattttgcattgttgatcccaccctctgcactcctgcaact
caaccttttcagtttgttgaaacacttcaaccataccttaagaagcaggttgacaataaa
tcaacagcccagttgcttgaaagtataatttttgtaattgatgctgttcttccactcata
tggaagccaccacaatctgtggtaatagagctagagcaggatctgaagcagatgattgtt
cgacactcctttttgacagttgtgcatgcctgtatcaagtgcctttgcgcccttagcaaa
gcagcagatagagggccaaggttattggaataccttgtaaacattttttacaagcatctg
tcgggttctaactcttctaattctgatagtcagcttttgggccgatcattgttttgtctt
ggactgctccttaggtatggttctcaactcatggcagcatccgaaaatcaacttgatttc
ccaaagattatcagcttgctgaagaaggaatatcttctcaaggatgatttcagcttgaag
gttcgaggtttgcaggctttgggatacatacttattgcaaagcctgattttatgctacgt
aaagatatctcaaccctaatagagtcatcattgtcttctgttgttgattatagattaaag
attcaaggattgcagaacctttttgagtatctacgtgatgcggaaagccagctcaatgca
gagagtactggcaagcctacacccaatgcaacaaacggtggaagtgaagtgcctgttgct
gcaggtgctggagatactaacatatgcggtggtattatccaattatattggaattctatt
cttgaaagatgcttggatataaatgatcaagtccgtcaaactgcactaaagattgttgaa
attgttctccgccagggtttggttcaccccattacttgtgttccacaccttatagcacta
gaaactgacccactggaggggaactcaaagttggctcatcatctgctaatgaatatgaat
gaaaagtacccttcattttttgaaagccggttaggtgatggcctgcagatgtcatttcga
tttttcgagtccacaatcagcaatcatgatatggtggccacaaacatgaaatctaatcca
attgcgtttgttaaacctgggatatctcgaatataccgcctcatccgtgcaaaccggaat
tccaggaacaaatttgtacactcaatagtccgtaaatttgagggtgataaccgcagttac
cccacaattagctttctcatgtactgtgctgaagttcttgcgtctctcccattcacaagc
cctgatgagccactttacttgatatatgatataaatcgggttattcaattaagagctgga
gcagttgaggcaaatttgaaaaattggacttccatgtatcagcagcaagaaatggtgggt
atgccaagagacactggtgatgttatgcatgagcctgggggatgctctgaccaaaatttg
gttgatgtctctcaaatgatgcttggcaatacatgcagcacgccagttgttaacatggcc
aaacttcaggaggattgccatggcgcgatagccctgcagctccttctcaagctgaagaga
catctgaaaactgtctatagtttaaccgatgcccggtgtcaggcattttctttgaaggat
ccaccaaaatctggcgaaacaatctccaagcagaatatcccattgaacattagtaatacc
aacaccagtttgccgagctgcccgcaggatgcagcacgtgtataccaggatttcaagaca
gtgctgcgagaagacaccgtggactacgggatgtacaccgtttcggcccagaaaaaacgt
ccgactccaagaagctcgtcgagagtaagaagaccggcggctgttacaagaggccgtggt
ggtggtggtggtggtggtgatgaggacaccgatgacgaagattggactggtggtggagca
agagtgctggacttcagcgctcagggtgggcgagtaacaaggcagagggtccaagtctga

DBGET integrated database retrieval system