Oryza sativa japonica (Japanese rice): 4342307
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Entry
4342307 CDS
T01015
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4342307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4342307
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
4342307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
OB_RNB
Motif
Other DBs
NCBI-GeneID:
4342307
NCBI-ProteinID:
XP_015647993
UniProt:
A0A0P0X1Y7
Q0D8V4
LinkDB
All DBs
Position
7:join(1292147..1292422,1292900..1293757)
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AA seq
377 aa
AA seq
DB search
MAAAAAAGAAAGGGFVGERRKLFVGGIPTSAQEAELRGHFGQYGAVRSVIVMRDKETGHG
RGFGFVEFEEEEDAARALGDGEHPRHLICGRVVDVKRARARPQRNHDDQSSQHQHFGQGQ
DQGHQPAPVSGTEDGGDGMNYASKKVFIGGLRDNITEEEFKTYFESFGTVTDVVVIYDSM
TNRSRGFGFVTFDSEEAVRKVIEHSFHDLKGTRVEAKIAIPKDASYYRNGRGRGSRNFGG
RGHAGFDGPSYQPYNDRYGFYNSYNMPQPVPPHPYYPGVYYGMGGGYPYANAYSNMGAPA
NIPPGMMTRRPVYGAYPPMFPGYGVIYRGYVGAAPSIQHDSNGGSDSKKDQTSVDVQEVD
SAASVATKLEFMKLGSQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcgggggcggcggcgggtggggggttcgttggggagaggagg
aagctgttcgtgggagggatcccgacgtcggcgcaggaggcggagctgcggggccacttc
gggcagtacggggcggtgaggtcggtgatcgtgatgcgggacaaggagaccgggcatggc
cgggggttcgggttcgtggagttcgaggaggaggaggacgccgccagggcgctcggcgac
ggggagcaccccaggcacctcatctgcggccgcgtcgttgatgtcaagagggctagggca
aggcctcaacgaaaccatgatgatcaatcttcacagcatcagcacttcggacagggtcag
gatcagggtcaccagccagcacctgtgagtggtacagaggatggcggcgacggcatgaac
tatgcttcgaagaaggtctttattggtggtctgcgggacaacatcactgaggaggagttc
aagacatatttcgagagttttggcaccgtaacagatgtggtagtcatatatgacagtatg
acaaacaggtctagggggtttggtttcgtcacctttgactcagaggaagcggtgaggaag
gtgatagaacacagttttcatgacttgaaaggaacaagggtagaagccaagattgccatc
cccaaggatgcttcgtattaccgtaatggcagaggtcgtggctcaagaaactttggtgga
aggggtcatgctggttttgatggtccctcgtaccaaccatacaatgacagatatggtttc
tacaacagctataatatgcctcaacctgttccaccacatccctactatcctggtgtatat
tatggtatgggaggaggttatccctatgcgaatgcatattcaaacatgggagcccctgct
aatattcctccaggcatgatgacaaggcgtccagtttatggtgcatatcctccaatgttt
ccagggtacggcgttatatatagaggttatgtgggtgctgcaccctctattcagcatgat
agtaatggtgggagcgatagcaaaaaggatcaaacttcagtagatgtacaagaagttgac
agtgctgcttccgttgcaacaaaacttgagtttatgaagctagggtcacaatga
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